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This uses a single .cc file containing almost all the code in the
repository to perform whole program analysis.
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These flags are needed so the code actually compiles, so can't only be
set on Travis.
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Also some other cleanups. This PR means that future PRs, i.e. the PGC PR,
must not break the rules established here.
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Most of the auto-tests should use this fixture, but I've only done a few
to set an example.
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Have one script per build. This means more duplication between the
scripts, but it's much easier to understand and to run locally.
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