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authorAlberto Ruiz <aruiz@um.es>2012-02-27 09:25:08 +0100
committerAlberto Ruiz <aruiz@um.es>2012-02-27 09:25:08 +0100
commit6399320e0043275baae2b20c87798c27efd6bf33 (patch)
treeb133814d7b82e230cc11b9eb1e50275aa95e02ae
parent47ea0f25eed9ab4a9bcdb4da2cf573a26883f9d4 (diff)
merge
-rw-r--r--CHANGES.md5
-rw-r--r--THANKS.md2
-rw-r--r--lib/Numeric/GSL/Integration.hs104
-rw-r--r--lib/Numeric/GSL/gsl-aux.c42
-rw-r--r--lib/Numeric/LinearAlgebra/Algorithms.hs2
5 files changed, 152 insertions, 3 deletions
diff --git a/CHANGES.md b/CHANGES.md
index f437900..10be500 100644
--- a/CHANGES.md
+++ b/CHANGES.md
@@ -1,7 +1,10 @@
10.13.2.0 10.13.2.0
2-------- 2--------
3 3
4msadams and msbdf methods for ode 4- integration over infinite intervals
5
6- msadams and msbdf methods for ode
7
5 8
60.13.0.0 90.13.0.0
7-------- 10--------
diff --git a/THANKS.md b/THANKS.md
index e2eaa97..23c93bb 100644
--- a/THANKS.md
+++ b/THANKS.md
@@ -107,3 +107,5 @@ module reorganization, monadic mapVectorM, and many other improvements.
107 107
108- Daniel Fischer reported some Haddock markup errors. 108- Daniel Fischer reported some Haddock markup errors.
109 109
110- Danny Chan added support for integration over infinite intervals.
111
diff --git a/lib/Numeric/GSL/Integration.hs b/lib/Numeric/GSL/Integration.hs
index a0e922b..2330fc6 100644
--- a/lib/Numeric/GSL/Integration.hs
+++ b/lib/Numeric/GSL/Integration.hs
@@ -17,7 +17,10 @@ Numerical integration routines.
17 17
18module Numeric.GSL.Integration ( 18module Numeric.GSL.Integration (
19 integrateQNG, 19 integrateQNG,
20 integrateQAGS 20 integrateQAGS,
21 integrateQAGI,
22 integrateQAGIU,
23 integrateQAGIL
21) where 24) where
22 25
23import Foreign.C.Types 26import Foreign.C.Types
@@ -94,3 +97,102 @@ integrateQNG prec f a b = unsafePerformIO $ do
94foreign import ccall "gsl-aux.h integrate_qng" 97foreign import ccall "gsl-aux.h integrate_qng"
95 c_integrate_qng :: FunPtr (Double-> Ptr() -> Double) -> Double -> Double -> Double 98 c_integrate_qng :: FunPtr (Double-> Ptr() -> Double) -> Double -> Double -> Double
96 -> Ptr Double -> Ptr Double -> IO CInt 99 -> Ptr Double -> Ptr Double -> IO CInt
100
101--------------------------------------------------------------------
102{- | Numerical integration using /gsl_integration_qagi/ (integration over the infinite integral -Inf..Inf using QAGS).
103For example:
104
105@\> let quad = integrateQAGI 1E-9 1000
106\> let f a x = exp(-a * x^2)
107\> quad (f 0.5)
108(2.5066282746310002,6.229215880648858e-11)@
109
110-}
111
112integrateQAGI :: Double -- ^ precision (e.g. 1E-9)
113 -> Int -- ^ size of auxiliary workspace (e.g. 1000)
114 -> (Double -> Double) -- ^ function to be integrated on the interval (-Inf,Inf)
115 -> (Double, Double) -- ^ result of the integration and error
116integrateQAGI prec n f = unsafePerformIO $ do
117 r <- malloc
118 e <- malloc
119 fp <- mkfun (\x _ -> f x)
120 c_integrate_qagi fp prec (fromIntegral n) r e // check "integrate_qagi"
121 vr <- peek r
122 ve <- peek e
123 let result = (vr,ve)
124 free r
125 free e
126 freeHaskellFunPtr fp
127 return result
128
129foreign import ccall "gsl-aux.h integrate_qagi"
130 c_integrate_qagi :: FunPtr (Double-> Ptr() -> Double) -> Double -> CInt
131 -> Ptr Double -> Ptr Double -> IO CInt
132
133--------------------------------------------------------------------
134{- | Numerical integration using /gsl_integration_qagiu/ (integration over the semi-infinite integral a..Inf).
135For example:
136
137@\> let quad = integrateQAGIU 1E-9 1000
138\> let f a x = exp(-a * x^2)
139\> quad (f 0.5) 0
140(1.2533141373155001,3.114607940324429e-11)@
141
142-}
143
144integrateQAGIU :: Double -- ^ precision (e.g. 1E-9)
145 -> Int -- ^ size of auxiliary workspace (e.g. 1000)
146 -> (Double -> Double) -- ^ function to be integrated on the interval (a,Inf)
147 -> Double -- ^ a
148 -> (Double, Double) -- ^ result of the integration and error
149integrateQAGIU prec n f a = unsafePerformIO $ do
150 r <- malloc
151 e <- malloc
152 fp <- mkfun (\x _ -> f x)
153 c_integrate_qagiu fp a prec (fromIntegral n) r e // check "integrate_qagiu"
154 vr <- peek r
155 ve <- peek e
156 let result = (vr,ve)
157 free r
158 free e
159 freeHaskellFunPtr fp
160 return result
161
162foreign import ccall "gsl-aux.h integrate_qagiu"
163 c_integrate_qagiu :: FunPtr (Double-> Ptr() -> Double) -> Double -> Double -> CInt
164 -> Ptr Double -> Ptr Double -> IO CInt
165
166--------------------------------------------------------------------
167{- | Numerical integration using /gsl_integration_qagil/ (integration over the semi-infinite integral -Inf..b).
168For example:
169
170@\> let quad = integrateQAGIL 1E-9 1000
171\> let f a x = exp(-a * x^2)
172\> quad (f 0.5) 0
173(1.2533141373155001,3.114607940324429e-11)@
174
175-}
176
177integrateQAGIL :: Double -- ^ precision (e.g. 1E-9)
178 -> Int -- ^ size of auxiliary workspace (e.g. 1000)
179 -> (Double -> Double) -- ^ function to be integrated on the interval (a,Inf)
180 -> Double -- ^ b
181 -> (Double, Double) -- ^ result of the integration and error
182integrateQAGIL prec n f b = unsafePerformIO $ do
183 r <- malloc
184 e <- malloc
185 fp <- mkfun (\x _ -> f x)
186 c_integrate_qagil fp b prec (fromIntegral n) r e // check "integrate_qagil"
187 vr <- peek r
188 ve <- peek e
189 let result = (vr,ve)
190 free r
191 free e
192 freeHaskellFunPtr fp
193 return result
194
195foreign import ccall "gsl-aux.h integrate_qagil"
196 c_integrate_qagil :: FunPtr (Double-> Ptr() -> Double) -> Double -> Double -> CInt
197 -> Ptr Double -> Ptr Double -> IO CInt
198
diff --git a/lib/Numeric/GSL/gsl-aux.c b/lib/Numeric/GSL/gsl-aux.c
index f74e2e3..7f1cf68 100644
--- a/lib/Numeric/GSL/gsl-aux.c
+++ b/lib/Numeric/GSL/gsl-aux.c
@@ -761,6 +761,48 @@ int integrate_qags(double f(double,void*), double a, double b, double prec, int
761 OK 761 OK
762} 762}
763 763
764int integrate_qagi(double f(double,void*), double prec, int w,
765 double *result, double* error) {
766 DEBUGMSG("integrate_qagi");
767 gsl_integration_workspace * wk = gsl_integration_workspace_alloc (w);
768 gsl_function F;
769 F.function = f;
770 F.params = NULL;
771 int res = gsl_integration_qagi (&F, 0, prec, w,wk, result, error);
772 CHECK(res,res);
773 gsl_integration_workspace_free (wk);
774 OK
775}
776
777
778int integrate_qagiu(double f(double,void*), double a, double prec, int w,
779 double *result, double* error) {
780 DEBUGMSG("integrate_qagiu");
781 gsl_integration_workspace * wk = gsl_integration_workspace_alloc (w);
782 gsl_function F;
783 F.function = f;
784 F.params = NULL;
785 int res = gsl_integration_qagiu (&F, a, 0, prec, w,wk, result, error);
786 CHECK(res,res);
787 gsl_integration_workspace_free (wk);
788 OK
789}
790
791
792int integrate_qagil(double f(double,void*), double b, double prec, int w,
793 double *result, double* error) {
794 DEBUGMSG("integrate_qagil");
795 gsl_integration_workspace * wk = gsl_integration_workspace_alloc (w);
796 gsl_function F;
797 F.function = f;
798 F.params = NULL;
799 int res = gsl_integration_qagil (&F, b, 0, prec, w,wk, result, error);
800 CHECK(res,res);
801 gsl_integration_workspace_free (wk);
802 OK
803}
804
805
764int polySolve(KRVEC(a), CVEC(z)) { 806int polySolve(KRVEC(a), CVEC(z)) {
765 DEBUGMSG("polySolve"); 807 DEBUGMSG("polySolve");
766 REQUIRES(an>1,BAD_SIZE); 808 REQUIRES(an>1,BAD_SIZE);
diff --git a/lib/Numeric/LinearAlgebra/Algorithms.hs b/lib/Numeric/LinearAlgebra/Algorithms.hs
index e2ecd4d..435cc5a 100644
--- a/lib/Numeric/LinearAlgebra/Algorithms.hs
+++ b/lib/Numeric/LinearAlgebra/Algorithms.hs
@@ -209,7 +209,7 @@ rightSV :: Field t => Matrix t -> (Vector Double, Matrix t)
209rightSV m | vertical m = let (_,s,v) = thinSVD m in (s,v) 209rightSV m | vertical m = let (_,s,v) = thinSVD m in (s,v)
210 | otherwise = let (_,s,v) = svd m in (s,v) 210 | otherwise = let (_,s,v) = svd m in (s,v)
211 211
212-- | Singular values and all right singular vectors. 212-- | Singular values and all left singular vectors.
213leftSV :: Field t => Matrix t -> (Matrix t, Vector Double) 213leftSV :: Field t => Matrix t -> (Matrix t, Vector Double)
214leftSV m | vertical m = let (u,s,_) = svd m in (u,s) 214leftSV m | vertical m = let (u,s,_) = svd m in (u,s)
215 | otherwise = let (u,s,_) = thinSVD m in (u,s) 215 | otherwise = let (u,s,_) = thinSVD m in (u,s)