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-rw-r--r--packages/sundials/src/Main.hs32
-rw-r--r--packages/sundials/src/helpers.c31
-rw-r--r--packages/sundials/src/helpers.h2
-rw-r--r--packages/sundials/sundials.cabal25
4 files changed, 66 insertions, 24 deletions
diff --git a/packages/sundials/src/Main.hs b/packages/sundials/src/Main.hs
index 3d5f941..bab5710 100644
--- a/packages/sundials/src/Main.hs
+++ b/packages/sundials/src/Main.hs
@@ -55,6 +55,13 @@ vectorToC vec len ptr = do
55 ptr' <- newForeignPtr_ ptr 55 ptr' <- newForeignPtr_ ptr
56 V.copy (VM.unsafeFromForeignPtr0 ptr' len) vec 56 V.copy (VM.unsafeFromForeignPtr0 ptr' len) vec
57 57
58foreign export ccall singleEq :: Double -> Double -> IO Double
59
60singleEq :: Double -> Double -> IO Double
61singleEq t u = return $ lamda * u + 1.0 / (1.0 + t * t) - lamda * atan t
62 where
63 lamda = -100.0
64
58solve :: (CDouble -> V.Vector CDouble -> V.Vector CDouble) -> 65solve :: (CDouble -> V.Vector CDouble -> V.Vector CDouble) ->
59 V.Vector Double -> 66 V.Vector Double ->
60 CDouble -> 67 CDouble ->
@@ -89,29 +96,6 @@ solve fun f0 lambda = unsafePerformIO $ do
89 realtype abstol = 1.0e-10; 96 realtype abstol = 1.0e-10;
90 realtype lamda = -100.0; /* stiffness parameter */ 97 realtype lamda = -100.0; /* stiffness parameter */
91 98
92 /* Beginning of stolen code from the Fortran interface */
93
94 N_Vector F2C_ARKODE_vec;
95 F2C_ARKODE_vec = NULL;
96 F2C_ARKODE_vec = N_VNewEmpty_Serial(NEQ); /* was *N */
97 if (F2C_ARKODE_vec == NULL) return 1;
98
99 /* Check for required vector operations */
100 if(F2C_ARKODE_vec->ops->nvgetarraypointer == NULL) {
101 fprintf(stderr, "Error: getarraypointer vector operation is not implemented.\n\n");
102 return 1;
103 }
104 if(F2C_ARKODE_vec->ops->nvsetarraypointer == NULL) {
105 fprintf(stderr, "Error: setarraypointer vector operation is not implemented.\n\n");
106 return 1;
107 }
108 if(F2C_ARKODE_vec->ops->nvcloneempty == NULL) {
109 fprintf(stderr, "Error: cloneempty vector operation is not implemented.\n\n");
110 return 1;
111 }
112
113 /* End of stolen code from the Fortran interface */
114
115 /* Initial diagnostics output */ 99 /* Initial diagnostics output */
116 printf("\nAnalytical ODE test problem:\n"); 100 printf("\nAnalytical ODE test problem:\n");
117 printf(" lamda = %"GSYM"\n", lamda); 101 printf(" lamda = %"GSYM"\n", lamda);
@@ -130,7 +114,7 @@ solve fun f0 lambda = unsafePerformIO $ do
130 /* right-hand side function in y'=f(t,y), the inital time T0, and */ 114 /* right-hand side function in y'=f(t,y), the inital time T0, and */
131 /* the initial dependent variable vector y. Note: since this */ 115 /* the initial dependent variable vector y. Note: since this */
132 /* problem is fully implicit, we set f_E to NULL and f_I to f. */ 116 /* problem is fully implicit, we set f_E to NULL and f_I to f. */
133 flag = ARKodeInit(arkode_mem, NULL, f, T0, y); 117 flag = ARKodeInit(arkode_mem, NULL, FARKfi, T0, y);
134 if (check_flag(&flag, "ARKodeInit", 1)) return 1; 118 if (check_flag(&flag, "ARKodeInit", 1)) return 1;
135 119
136 /* Set routines */ 120 /* Set routines */
diff --git a/packages/sundials/src/helpers.c b/packages/sundials/src/helpers.c
index d51310c..eab5ac9 100644
--- a/packages/sundials/src/helpers.c
+++ b/packages/sundials/src/helpers.c
@@ -8,6 +8,12 @@
8#include <sundials/sundials_types.h> /* definition of type realtype */ 8#include <sundials/sundials_types.h> /* definition of type realtype */
9#include <sundials/sundials_math.h> 9#include <sundials/sundials_math.h>
10 10
11#include "farkode.h"
12
13#include <HsFFI.h>
14#include "Main_stub.h"
15
16
11/* Check function return value... 17/* Check function return value...
12 opt == 0 means SUNDIALS function allocates memory so check if 18 opt == 0 means SUNDIALS function allocates memory so check if
13 returned NULL pointer 19 returned NULL pointer
@@ -56,6 +62,31 @@ int f(realtype t, N_Vector y, N_Vector ydot, void *user_data)
56 return 0; /* return with success */ 62 return 0; /* return with success */
57} 63}
58 64
65int FARK_IMP_FUN(realtype *T, realtype *Y, realtype *YDOT,
66 long int *IPAR, realtype *RPAR, int *IER) {
67 realtype t = *T;
68 realtype u = Y[0];
69 realtype lamda = -100.0;
70 YDOT[0] = singleEq(t, u);
71 return 0;
72}
73
74/* C interface to user-supplied FORTRAN function FARKIFUN; see
75 farkode.h for further details */
76int FARKfi(realtype t, N_Vector y, N_Vector ydot, void *user_data) {
77
78 int ier;
79 realtype *ydata, *dydata;
80 FARKUserData ARK_userdata;
81 ydata = N_VGetArrayPointer(y);
82 dydata = N_VGetArrayPointer(ydot);
83 ARK_userdata = (FARKUserData) user_data;
84
85 FARK_IMP_FUN(&t, ydata, dydata, ARK_userdata->ipar,
86 ARK_userdata->rpar, &ier);
87 return(ier);
88}
89
59/* Jacobian routine to compute J(t,y) = df/dy. */ 90/* Jacobian routine to compute J(t,y) = df/dy. */
60int Jac(realtype t, N_Vector y, N_Vector fy, SUNMatrix J, 91int Jac(realtype t, N_Vector y, N_Vector fy, SUNMatrix J,
61 void *user_data, N_Vector tmp1, N_Vector tmp2, N_Vector tmp3) 92 void *user_data, N_Vector tmp1, N_Vector tmp2, N_Vector tmp3)
diff --git a/packages/sundials/src/helpers.h b/packages/sundials/src/helpers.h
index 87b0c81..3b50163 100644
--- a/packages/sundials/src/helpers.h
+++ b/packages/sundials/src/helpers.h
@@ -21,6 +21,8 @@ int check_flag(void *flagvalue, const char *funcname, int opt);
21/* f routine to compute the ODE RHS function f(t,y). */ 21/* f routine to compute the ODE RHS function f(t,y). */
22int f(realtype t, N_Vector y, N_Vector ydot, void *user_data); 22int f(realtype t, N_Vector y, N_Vector ydot, void *user_data);
23 23
24int FARKfi(realtype t, N_Vector y, N_Vector ydot, void *user_data);
25
24/* Jacobian routine to compute J(t,y) = df/dy. */ 26/* Jacobian routine to compute J(t,y) = df/dy. */
25int Jac(realtype t, N_Vector y, N_Vector fy, SUNMatrix J, 27int Jac(realtype t, N_Vector y, N_Vector fy, SUNMatrix J,
26 void *user_data, N_Vector tmp1, N_Vector tmp2, N_Vector tmp3); 28 void *user_data, N_Vector tmp1, N_Vector tmp2, N_Vector tmp3);
diff --git a/packages/sundials/sundials.cabal b/packages/sundials/sundials.cabal
index a68f33a..9b2db12 100644
--- a/packages/sundials/sundials.cabal
+++ b/packages/sundials/sundials.cabal
@@ -18,6 +18,16 @@ cabal-version: >=1.10
18 18
19extra-source-files: src/helpers.c, src/helpers.h 19extra-source-files: src/helpers.c, src/helpers.h
20 20
21executable ExportAndImport.dylib
22 main-is: ExportAndImport.hs
23 other-extensions: ForeignFunctionInterface
24 build-depends: base >=4.10
25 hs-source-dirs: src
26 default-language: Haskell2010
27 include-dirs: src
28 ghc-options: -O2 -shared -fPIC -dynamic
29 extra-libraries: HSrts-ghc8.2.2
30
21executable sundials 31executable sundials
22 main-is: Main.hs 32 main-is: Main.hs
23 -- other-modules: 33 -- other-modules:
@@ -31,3 +41,18 @@ executable sundials
31 default-language: Haskell2010 41 default-language: Haskell2010
32 extra-libraries: sundials_arkode 42 extra-libraries: sundials_arkode
33 C-sources: src/helpers.c src/helpers.h 43 C-sources: src/helpers.c src/helpers.h
44
45executable hsundials.dylib
46 main-is: Main.hs
47 -- other-modules:
48 other-extensions: QuasiQuotes, TemplateHaskell, MultiWayIf, OverloadedStrings
49 build-depends: base >=4.10 && <4.11,
50 inline-c >=0.6 && <0.7,
51 vector >=0.12 && <0.13,
52 template-haskell >=2.12 && <2.13,
53 containers >=0.5 && <0.6
54 hs-source-dirs: src
55 ghc-options: -O2 -shared -fPIC -dynamic
56 default-language: Haskell2010
57 extra-libraries: sundials_arkode, HSrts-ghc8.2.2
58 C-sources: src/helpers.c src/helpers.h