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-rw-r--r--packages/tests/hmatrix-tests.cabal6
-rw-r--r--packages/tests/src/Numeric/GSL/Tests.hs2
-rw-r--r--packages/tests/src/Numeric/LinearAlgebra/Tests.hs191
-rw-r--r--packages/tests/src/Numeric/LinearAlgebra/Tests/Instances.hs19
-rw-r--r--packages/tests/src/Numeric/LinearAlgebra/Tests/Properties.hs147
5 files changed, 184 insertions, 181 deletions
diff --git a/packages/tests/hmatrix-tests.cabal b/packages/tests/hmatrix-tests.cabal
index 0514843..de796e8 100644
--- a/packages/tests/hmatrix-tests.cabal
+++ b/packages/tests/hmatrix-tests.cabal
@@ -1,5 +1,5 @@
1Name: hmatrix-tests 1Name: hmatrix-tests
2Version: 0.4.1.0 2Version: 0.5.0.0
3License: BSD3 3License: BSD3
4License-file: LICENSE 4License-file: LICENSE
5Author: Alberto Ruiz 5Author: Alberto Ruiz
@@ -28,9 +28,9 @@ library
28 28
29 Build-Depends: base >= 4 && < 5, 29 Build-Depends: base >= 4 && < 5,
30 QuickCheck >= 2, HUnit, random, 30 QuickCheck >= 2, HUnit, random,
31 hmatrix >= 0.16 31 hmatrix >= 0.17
32 if flag(gsl) 32 if flag(gsl)
33 Build-Depends: hmatrix-gsl >= 0.16 33 Build-Depends: hmatrix-gsl >= 0.17
34 34
35 hs-source-dirs: src 35 hs-source-dirs: src
36 36
diff --git a/packages/tests/src/Numeric/GSL/Tests.hs b/packages/tests/src/Numeric/GSL/Tests.hs
index 9dff6f5..2e225b6 100644
--- a/packages/tests/src/Numeric/GSL/Tests.hs
+++ b/packages/tests/src/Numeric/GSL/Tests.hs
@@ -19,7 +19,7 @@ import System.Exit (exitFailure)
19 19
20import Test.HUnit (runTestTT, failures, Test(..), errors) 20import Test.HUnit (runTestTT, failures, Test(..), errors)
21 21
22import Numeric.LinearAlgebra 22import Numeric.LinearAlgebra.HMatrix
23import Numeric.GSL 23import Numeric.GSL
24import Numeric.LinearAlgebra.Tests (qCheck, utest) 24import Numeric.LinearAlgebra.Tests (qCheck, utest)
25import Numeric.LinearAlgebra.Tests.Properties ((|~|), (~~)) 25import Numeric.LinearAlgebra.Tests.Properties ((|~|), (~~))
diff --git a/packages/tests/src/Numeric/LinearAlgebra/Tests.hs b/packages/tests/src/Numeric/LinearAlgebra/Tests.hs
index 713af79..14d02e4 100644
--- a/packages/tests/src/Numeric/LinearAlgebra/Tests.hs
+++ b/packages/tests/src/Numeric/LinearAlgebra/Tests.hs
@@ -1,9 +1,9 @@
1{-# LANGUAGE CPP #-} 1{-# LANGUAGE CPP #-}
2{-# OPTIONS_GHC -fno-warn-unused-imports -fno-warn-incomplete-patterns #-} 2{-# OPTIONS_GHC -fno-warn-unused-imports -fno-warn-incomplete-patterns #-}
3{-# LANGUAGE DataKinds #-} 3{-# LANGUAGE DataKinds #-}
4{-# LANGUAGE TypeFamilies #-}
5{-# LANGUAGE FlexibleContexts #-} 4{-# LANGUAGE FlexibleContexts #-}
6{-# LANGUAGE RankNTypes #-} 5{-# LANGUAGE GADTs #-}
6
7 7
8----------------------------------------------------------------------------- 8-----------------------------------------------------------------------------
9{- | 9{- |
@@ -28,12 +28,10 @@ module Numeric.LinearAlgebra.Tests(
28--, runBigTests 28--, runBigTests
29) where 29) where
30 30
31import Numeric.LinearAlgebra 31import Numeric.LinearAlgebra.HMatrix
32import Numeric.LinearAlgebra.HMatrix hiding ((<>),linearSolve) 32import Numeric.LinearAlgebra.Devel hiding (vec)
33import Numeric.LinearAlgebra.Util hiding (ones)
33import Numeric.LinearAlgebra.Static(L) 34import Numeric.LinearAlgebra.Static(L)
34import Numeric.LinearAlgebra.Util(col,row)
35import Data.Packed
36import Numeric.LinearAlgebra.LAPACK
37import Numeric.LinearAlgebra.Tests.Instances 35import Numeric.LinearAlgebra.Tests.Instances
38import Numeric.LinearAlgebra.Tests.Properties 36import Numeric.LinearAlgebra.Tests.Properties
39import Test.HUnit hiding ((~:),test,Testable,State) 37import Test.HUnit hiding ((~:),test,Testable,State)
@@ -44,20 +42,16 @@ import qualified Prelude
44import System.CPUTime 42import System.CPUTime
45import System.Exit 43import System.Exit
46import Text.Printf 44import Text.Printf
47import Data.Packed.Development(unsafeFromForeignPtr,unsafeToForeignPtr) 45import Numeric.LinearAlgebra.Devel(unsafeFromForeignPtr,unsafeToForeignPtr)
48import Control.Arrow((***)) 46import Control.Arrow((***))
49import Debug.Trace 47import Debug.Trace
50import Control.Monad(when) 48import Control.Monad(when)
51import Numeric.LinearAlgebra.Util hiding (ones,row,col)
52import Control.Applicative 49import Control.Applicative
53import Control.Monad(ap) 50import Control.Monad(ap)
54 51
55import Data.Packed.ST
56
57import Test.QuickCheck(Arbitrary,arbitrary,coarbitrary,choose,vector 52import Test.QuickCheck(Arbitrary,arbitrary,coarbitrary,choose,vector
58 ,sized,classify,Testable,Property 53 ,sized,classify,Testable,Property
59 ,quickCheckWithResult,maxSize,stdArgs,shrink) 54 ,quickCheckWithResult,maxSize,stdArgs,shrink)
60import qualified Test.QuickCheck as T
61 55
62import Test.QuickCheck.Test(isSuccess) 56import Test.QuickCheck.Test(isSuccess)
63 57
@@ -89,7 +83,7 @@ detTest1 = det m == 26
89 mc = (3><3) 83 mc = (3><3)
90 [ 1, 2, 3 84 [ 1, 2, 3
91 , 4, 5, 7 85 , 4, 5, 7
92 , 2, 8, i 86 , 2, 8, iC
93 ] 87 ]
94 88
95detTest2 = inv1 |~| inv2 && [det1] ~~ [det2] 89detTest2 = inv1 |~| inv2 && [det1] ~~ [det2]
@@ -140,7 +134,7 @@ randomTestGaussian = c :~1~: snd (meanCov dat) where
140 2,4,0, 134 2,4,0,
141 -2,2,1] 135 -2,2,1]
142 m = 3 |> [1,2,3] 136 m = 3 |> [1,2,3]
143 c = a <> trans a 137 c = a <> tr a
144 dat = gaussianSample 7 (10^6) m c 138 dat = gaussianSample 7 (10^6) m c
145 139
146randomTestUniform = c :~1~: snd (meanCov dat) where 140randomTestUniform = c :~1~: snd (meanCov dat) where
@@ -174,51 +168,51 @@ offsetTest = y == y' where
174 168
175normsVTest = TestList [ 169normsVTest = TestList [
176 utest "normv2CD" $ norm2PropC v 170 utest "normv2CD" $ norm2PropC v
177 , utest "normv2CF" $ norm2PropC (single v) 171-- , utest "normv2CF" $ norm2PropC (single v)
178#ifndef NONORMVTEST 172#ifndef NONORMVTEST
179 , utest "normv2D" $ norm2PropR x 173 , utest "normv2D" $ norm2PropR x
180 , utest "normv2F" $ norm2PropR (single x) 174-- , utest "normv2F" $ norm2PropR (single x)
181#endif 175#endif
182 , utest "normv1CD" $ norm1 v == 8 176 , utest "normv1CD" $ norm_1 v == 8
183 , utest "normv1CF" $ norm1 (single v) == 8 177-- , utest "normv1CF" $ norm_1 (single v) == 8
184 , utest "normv1D" $ norm1 x == 6 178 , utest "normv1D" $ norm_1 x == 6
185 , utest "normv1F" $ norm1 (single x) == 6 179-- , utest "normv1F" $ norm_1 (single x) == 6
186 180
187 , utest "normvInfCD" $ normInf v == 5 181 , utest "normvInfCD" $ norm_Inf v == 5
188 , utest "normvInfCF" $ normInf (single v) == 5 182-- , utest "normvInfCF" $ norm_Inf (single v) == 5
189 , utest "normvInfD" $ normInf x == 3 183 , utest "normvInfD" $ norm_Inf x == 3
190 , utest "normvInfF" $ normInf (single x) == 3 184-- , utest "normvInfF" $ norm_Inf (single x) == 3
191 185
192 ] where v = fromList [1,-2,3:+4] :: Vector (Complex Double) 186 ] where v = fromList [1,-2,3:+4] :: Vector (Complex Double)
193 x = fromList [1,2,-3] :: Vector Double 187 x = fromList [1,2,-3] :: Vector Double
194#ifndef NONORMVTEST 188#ifndef NONORMVTEST
195 norm2PropR a = norm2 a =~= sqrt (udot a a) 189 norm2PropR a = norm_2 a =~= sqrt (udot a a)
196#endif 190#endif
197 norm2PropC a = norm2 a =~= realPart (sqrt (a <.> a)) 191 norm2PropC a = norm_2 a =~= realPart (sqrt (a `dot` a))
198 a =~= b = fromList [a] |~| fromList [b] 192 a =~= b = fromList [a] |~| fromList [b]
199 193
200normsMTest = TestList [ 194normsMTest = TestList [
201 utest "norm2mCD" $ pnorm PNorm2 v =~= 8.86164970498005 195 utest "norm2mCD" $ norm_2 v =~= 8.86164970498005
202 , utest "norm2mCF" $ pnorm PNorm2 (single v) =~= 8.86164970498005 196-- , utest "norm2mCF" $ norm_2 (single v) =~= 8.86164970498005
203 , utest "norm2mD" $ pnorm PNorm2 x =~= 5.96667765076216 197 , utest "norm2mD" $ norm_2 x =~= 5.96667765076216
204 , utest "norm2mF" $ pnorm PNorm2 (single x) =~= 5.96667765076216 198-- , utest "norm2mF" $ norm_2 (single x) =~= 5.96667765076216
205 199
206 , utest "norm1mCD" $ pnorm PNorm1 v == 9 200 , utest "norm1mCD" $ norm_1 v == 9
207 , utest "norm1mCF" $ pnorm PNorm1 (single v) == 9 201-- , utest "norm1mCF" $ norm_1 (single v) == 9
208 , utest "norm1mD" $ pnorm PNorm1 x == 7 202 , utest "norm1mD" $ norm_1 x == 7
209 , utest "norm1mF" $ pnorm PNorm1 (single x) == 7 203-- , utest "norm1mF" $ norm_1 (single x) == 7
210 204
211 , utest "normmInfCD" $ pnorm Infinity v == 12 205 , utest "normmInfCD" $ norm_Inf v == 12
212 , utest "normmInfCF" $ pnorm Infinity (single v) == 12 206-- , utest "normmInfCF" $ norm_Inf (single v) == 12
213 , utest "normmInfD" $ pnorm Infinity x == 8 207 , utest "normmInfD" $ norm_Inf x == 8
214 , utest "normmInfF" $ pnorm Infinity (single x) == 8 208-- , utest "normmInfF" $ norm_Inf (single x) == 8
215 209
216 , utest "normmFroCD" $ pnorm Frobenius v =~= 8.88819441731559 210 , utest "normmFroCD" $ norm_Frob v =~= 8.88819441731559
217 , utest "normmFroCF" $ pnorm Frobenius (single v) =~~= 8.88819441731559 211-- , utest "normmFroCF" $ norm_Frob (single v) =~~= 8.88819441731559
218 , utest "normmFroD" $ pnorm Frobenius x =~= 6.24499799839840 212 , utest "normmFroD" $ norm_Frob x =~= 6.24499799839840
219 , utest "normmFroF" $ pnorm Frobenius (single x) =~~= 6.24499799839840 213-- , utest "normmFroF" $ norm_Frob (single x) =~~= 6.24499799839840
220 214
221 ] where v = (2><2) [1,-2*i,3:+4,7] :: Matrix (Complex Double) 215 ] where v = (2><2) [1,-2*iC,3:+4,7] :: Matrix (Complex Double)
222 x = (2><2) [1,2,-3,5] :: Matrix Double 216 x = (2><2) [1,2,-3,5] :: Matrix Double
223 a =~= b = fromList [a] :~10~: fromList [b] 217 a =~= b = fromList [a] :~10~: fromList [b]
224 a =~~= b = fromList [a] :~5~: fromList [b] 218 a =~~= b = fromList [a] :~5~: fromList [b]
@@ -236,7 +230,7 @@ sumprodTest = TestList [
236 , utest "prodD" $ prodProp v 230 , utest "prodD" $ prodProp v
237 , utest "prodF" $ prodProp (single v) 231 , utest "prodF" $ prodProp (single v)
238 ] where v = fromList [1,2,3] :: Vector Double 232 ] where v = fromList [1,2,3] :: Vector Double
239 z = fromList [1,2-i,3+i] 233 z = fromList [1,2-iC,3+iC]
240 prodProp x = prodElements x == product (toList x) 234 prodProp x = prodElements x == product (toList x)
241 235
242--------------------------------------------------------------------- 236---------------------------------------------------------------------
@@ -250,7 +244,7 @@ chainTest = utest "chain" $ foldl1' (<>) ms |~| optimiseMult ms where
250 244
251--------------------------------------------------------------------- 245---------------------------------------------------------------------
252 246
253conjuTest m = mapVector conjugate (flatten (trans m)) == flatten (ctrans m) 247conjuTest m = cmap conjugate (flatten (conj (tr m))) == flatten (tr m)
254 248
255--------------------------------------------------------------------- 249---------------------------------------------------------------------
256 250
@@ -306,7 +300,7 @@ lift_maybe m = MaybeT $ do
306 300
307-- apply a test to successive elements of a vector, evaluates to true iff test passes for all pairs 301-- apply a test to successive elements of a vector, evaluates to true iff test passes for all pairs
308--successive_ :: Storable a => (a -> a -> Bool) -> Vector a -> Bool 302--successive_ :: Storable a => (a -> a -> Bool) -> Vector a -> Bool
309successive_ t v = maybe False (\_ -> True) $ evalState (runMaybeT (mapVectorM_ stp (subVector 1 (dim v - 1) v))) (v @> 0) 303successive_ t v = maybe False (\_ -> True) $ evalState (runMaybeT (mapVectorM_ stp (subVector 1 (size v - 1) v))) (v ! 0)
310 where stp e = do 304 where stp e = do
311 ep <- lift_maybe $ state_get 305 ep <- lift_maybe $ state_get
312 if t e ep 306 if t e ep
@@ -315,7 +309,7 @@ successive_ t v = maybe False (\_ -> True) $ evalState (runMaybeT (mapVectorM_ s
315 309
316-- operate on successive elements of a vector and return the resulting vector, whose length 1 less than that of the input 310-- operate on successive elements of a vector and return the resulting vector, whose length 1 less than that of the input
317--successive :: (Storable a, Storable b) => (a -> a -> b) -> Vector a -> Vector b 311--successive :: (Storable a, Storable b) => (a -> a -> b) -> Vector a -> Vector b
318successive f v = evalState (mapVectorM stp (subVector 1 (dim v - 1) v)) (v @> 0) 312successive f v = evalState (mapVectorM stp (subVector 1 (size v - 1) v)) (v ! 0)
319 where stp e = do 313 where stp e = do
320 ep <- state_get 314 ep <- state_get
321 state_put e 315 state_put e
@@ -384,12 +378,12 @@ kroneckerTest = utest "kronecker" ok
384 x = (4><2) [3,5..] 378 x = (4><2) [3,5..]
385 b = (2><5) [0,5..] 379 b = (2><5) [0,5..]
386 v1 = vec (a <> x <> b) 380 v1 = vec (a <> x <> b)
387 v2 = (trans b `kronecker` a) <> vec x 381 v2 = (tr b `kronecker` a) #> vec x
388 s = trans b <> b 382 s = tr b <> b
389 v3 = vec s 383 v3 = vec s
390 v4 = (dup 5 :: Matrix Double) <> vech s 384 v4 = (dup 5 :: Matrix Double) #> vech s
391 ok = v1 == v2 && v3 == v4 385 ok = v1 == v2 && v3 == v4
392 && vtrans 1 a == trans a 386 && vtrans 1 a == tr a
393 && vtrans (rows a) a == asColumn (vec a) 387 && vtrans (rows a) a == asColumn (vec a)
394 388
395-------------------------------------------------------------------------------- 389--------------------------------------------------------------------------------
@@ -419,8 +413,7 @@ indexProp g f x = a1 == g a2 && a2 == a3 && b1 == g b2 && b2 == b3
419runTests :: Int -- ^ maximum dimension 413runTests :: Int -- ^ maximum dimension
420 -> IO () 414 -> IO ()
421runTests n = do 415runTests n = do
422 let test :: forall t . T.Testable t => t -> IO () 416 let test p = qCheck n p
423 test p = qCheck n p
424 putStrLn "------ index" 417 putStrLn "------ index"
425 test( \m -> indexProp id flatten (single (m :: RM)) ) 418 test( \m -> indexProp id flatten (single (m :: RM)) )
426 test( \v -> indexProp id id (single (v :: Vector Double)) ) 419 test( \v -> indexProp id id (single (v :: Vector Double)) )
@@ -435,11 +428,11 @@ runTests n = do
435 test (multProp1 10 . cConsist) 428 test (multProp1 10 . cConsist)
436 test (multProp2 10 . rConsist) 429 test (multProp2 10 . rConsist)
437 test (multProp2 10 . cConsist) 430 test (multProp2 10 . cConsist)
438 putStrLn "------ mult Float" 431-- putStrLn "------ mult Float"
439 test (multProp1 6 . (single *** single) . rConsist) 432-- test (multProp1 6 . (single *** single) . rConsist)
440 test (multProp1 6 . (single *** single) . cConsist) 433-- test (multProp1 6 . (single *** single) . cConsist)
441 test (multProp2 6 . (single *** single) . rConsist) 434-- test (multProp2 6 . (single *** single) . rConsist)
442 test (multProp2 6 . (single *** single) . cConsist) 435-- test (multProp2 6 . (single *** single) . cConsist)
443 putStrLn "------ sub-trans" 436 putStrLn "------ sub-trans"
444 test (subProp . rM) 437 test (subProp . rM)
445 test (subProp . cM) 438 test (subProp . cM)
@@ -472,16 +465,16 @@ runTests n = do
472 putStrLn "------ svd" 465 putStrLn "------ svd"
473 test (svdProp1 . rM) 466 test (svdProp1 . rM)
474 test (svdProp1 . cM) 467 test (svdProp1 . cM)
475 test (svdProp1a svdR) 468 test (svdProp1a svd . rM)
476 test (svdProp1a svdC) 469 test (svdProp1a svd . cM)
477 test (svdProp1a svdRd) 470-- test (svdProp1a svdRd)
478 test (svdProp1b svdR) 471 test (svdProp1b svd . rM)
479 test (svdProp1b svdC) 472 test (svdProp1b svd . cM)
480 test (svdProp1b svdRd) 473-- test (svdProp1b svdRd)
481 test (svdProp2 thinSVDR) 474 test (svdProp2 thinSVD . rM)
482 test (svdProp2 thinSVDC) 475 test (svdProp2 thinSVD . cM)
483 test (svdProp2 thinSVDRd) 476-- test (svdProp2 thinSVDRd)
484 test (svdProp2 thinSVDCd) 477-- test (svdProp2 thinSVDCd)
485 test (svdProp3 . rM) 478 test (svdProp3 . rM)
486 test (svdProp3 . cM) 479 test (svdProp3 . cM)
487 test (svdProp4 . rM) 480 test (svdProp4 . rM)
@@ -494,10 +487,10 @@ runTests n = do
494 test (svdProp7 . cM) 487 test (svdProp7 . cM)
495 putStrLn "------ svdCd" 488 putStrLn "------ svdCd"
496#ifdef NOZGESDD 489#ifdef NOZGESDD
497 putStrLn "Omitted" 490-- putStrLn "Omitted"
498#else 491#else
499 test (svdProp1a svdCd) 492-- test (svdProp1a svdCd)
500 test (svdProp1b svdCd) 493-- test (svdProp1b svdCd)
501#endif 494#endif
502 putStrLn "------ eig" 495 putStrLn "------ eig"
503 test (eigSHProp . rHer) 496 test (eigSHProp . rHer)
@@ -515,10 +508,10 @@ runTests n = do
515 test (qrProp . rM) 508 test (qrProp . rM)
516 test (qrProp . cM) 509 test (qrProp . cM)
517 test (rqProp . rM) 510 test (rqProp . rM)
518 test (rqProp . cM) 511-- test (rqProp . cM)
519 test (rqProp1 . cM) 512 test (rqProp1 . cM)
520 test (rqProp2 . cM) 513 test (rqProp2 . cM)
521 test (rqProp3 . cM) 514-- test (rqProp3 . cM)
522 putStrLn "------ hess" 515 putStrLn "------ hess"
523 test (hessProp . rSq) 516 test (hessProp . rSq)
524 test (hessProp . cSq) 517 test (hessProp . cSq)
@@ -540,11 +533,11 @@ runTests n = do
540 test (\u -> cos u * tan u |~| sin (u::RM)) 533 test (\u -> cos u * tan u |~| sin (u::RM))
541 test $ (\u -> cos u * tan u |~| sin (u::CM)) . liftMatrix makeUnitary 534 test $ (\u -> cos u * tan u |~| sin (u::CM)) . liftMatrix makeUnitary
542 putStrLn "------ vector operations - Float" 535 putStrLn "------ vector operations - Float"
543 test (\u -> sin u ^ 2 + cos u ^ 2 |~~| (1::FM)) 536-- test (\u -> sin u ^ 2 + cos u ^ 2 |~~| (1::FM))
544 test $ (\u -> sin u ^ 2 + cos u ^ 2 |~~| (1::ZM)) . liftMatrix makeUnitary 537-- test $ (\u -> sin u ^ 2 + cos u ^ 2 |~~| (1::ZM)) . liftMatrix makeUnitary
545 test (\u -> sin u ** 2 + cos u ** 2 |~~| (1::FM)) 538-- test (\u -> sin u ** 2 + cos u ** 2 |~~| (1::FM))
546 test (\u -> cos u * tan u |~~| sin (u::FM)) 539-- test (\u -> cos u * tan u |~~| sin (u::FM))
547 test $ (\u -> cos u * tan u |~~| sin (u::ZM)) . liftMatrix makeUnitary 540-- test $ (\u -> cos u * tan u |~~| sin (u::ZM)) . liftMatrix makeUnitary
548 putStrLn "------ read . show" 541 putStrLn "------ read . show"
549 test (\m -> (m::RM) == read (show m)) 542 test (\m -> (m::RM) == read (show m))
550 test (\m -> (m::CM) == read (show m)) 543 test (\m -> (m::CM) == read (show m))
@@ -562,8 +555,8 @@ runTests n = do
562 , utest "expm1" (expmTest1) 555 , utest "expm1" (expmTest1)
563 , utest "expm2" (expmTest2) 556 , utest "expm2" (expmTest2)
564 , utest "arith1" $ ((ones (100,100) * 5 + 2)/0.5 - 7)**2 |~| (49 :: RM) 557 , utest "arith1" $ ((ones (100,100) * 5 + 2)/0.5 - 7)**2 |~| (49 :: RM)
565 , utest "arith2" $ ((scalar (1+i) * ones (100,100) * 5 + 2)/0.5 - 7)**2 |~| ( scalar (140*i-51) :: CM) 558 , utest "arith2" $ ((scalar (1+iC) * ones (100,100) * 5 + 2)/0.5 - 7)**2 |~| ( scalar (140*iC-51) :: CM)
566 , utest "arith3" $ exp (scalar i * ones(10,10)*pi) + 1 |~| 0 559 , utest "arith3" $ exp (scalar iC * ones(10,10)*pi) + 1 |~| 0
567 , utest "<\\>" $ (3><2) [2,0,0,3,1,1::Double] <\> 3|>[4,9,5] |~| 2|>[2,3] 560 , utest "<\\>" $ (3><2) [2,0,0,3,1,1::Double] <\> 3|>[4,9,5] |~| 2|>[2,3]
568-- , utest "gamma" (gamma 5 == 24.0) 561-- , utest "gamma" (gamma 5 == 24.0)
569-- , besselTest 562-- , besselTest
@@ -571,10 +564,10 @@ runTests n = do
571 , utest "randomGaussian" randomTestGaussian 564 , utest "randomGaussian" randomTestGaussian
572 , utest "randomUniform" randomTestUniform 565 , utest "randomUniform" randomTestUniform
573 , utest "buildVector/Matrix" $ 566 , utest "buildVector/Matrix" $
574 complex (10 |> [0::Double ..]) == buildVector 10 fromIntegral 567 complex (10 |> [0::Double ..]) == build 10 id
575 && ident 5 == buildMatrix 5 5 (\(r,c) -> if r==c then 1::Double else 0) 568 && ident 5 == build (5,5) (\r c -> if r==c then 1::Double else 0)
576 , utest "rank" $ rank ((2><3)[1,0,0,1,5*eps,0]) == 1 569 , utest "rank" $ rank ((2><3)[1,0,0,1,5*peps,0::Double]) == 1
577 && rank ((2><3)[1,0,0,1,7*eps,0]) == 2 570 && rank ((2><3)[1,0,0,1,7*peps,0::Double]) == 2
578 , utest "block" $ fromBlocks [[ident 3,0],[0,ident 4]] == (ident 7 :: CM) 571 , utest "block" $ fromBlocks [[ident 3,0],[0,ident 4]] == (ident 7 :: CM)
579 , mbCholTest 572 , mbCholTest
580 , utest "offset" offsetTest 573 , utest "offset" offsetTest
@@ -602,7 +595,7 @@ a |~~| b = a :~6~: b
602 595
603makeUnitary v | realPart n > 1 = v / scalar n 596makeUnitary v | realPart n > 1 = v / scalar n
604 | otherwise = v 597 | otherwise = v
605 where n = sqrt (v <.> v) 598 where n = sqrt (v `dot` v)
606 599
607-- -- | Some additional tests on big matrices. They take a few minutes. 600-- -- | Some additional tests on big matrices. They take a few minutes.
608-- runBigTests :: IO () 601-- runBigTests :: IO ()
@@ -668,9 +661,9 @@ manyvec5 xs = sumElements $ fromRows $ map (\x -> vec3 x (x**2) (x**3)) xs
668 661
669 662
670manyvec2 xs = sum $ map (\x -> sqrt(x^2 + (x**2)^2 +(x**3)^2)) xs 663manyvec2 xs = sum $ map (\x -> sqrt(x^2 + (x**2)^2 +(x**3)^2)) xs
671manyvec3 xs = sum $ map (pnorm PNorm2 . (\x -> fromList [x,x**2,x**3])) xs 664manyvec3 xs = sum $ map (norm_2 . (\x -> fromList [x,x**2,x**3])) xs
672 665
673manyvec4 xs = sum $ map (pnorm PNorm2 . (\x -> vec3 x (x**2) (x**3))) xs 666manyvec4 xs = sum $ map (norm_2 . (\x -> vec3 x (x**2) (x**3))) xs
674 667
675vec3 :: Double -> Double -> Double -> Vector Double 668vec3 :: Double -> Double -> Double -> Vector Double
676vec3 a b c = runSTVector $ do 669vec3 a b c = runSTVector $ do
@@ -695,11 +688,11 @@ mkVecBench = do
695 688
696subBench = do 689subBench = do
697 putStrLn "" 690 putStrLn ""
698 let g = foldl1' (.) (replicate (10^5) (\v -> subVector 1 (dim v -1) v)) 691 let g = foldl1' (.) (replicate (10^5) (\v -> subVector 1 (size v -1) v))
699 time "0.1M subVector " (g (konst 1 (1+10^5) :: Vector Double) @> 0) 692 time "0.1M subVector " (g (konst 1 (1+10^5) :: Vector Double) ! 0)
700 let f = foldl1' (.) (replicate (10^5) (fromRows.toRows)) 693 let f = foldl1' (.) (replicate (10^5) (fromRows.toRows))
701 time "subVector-join 3" (f (ident 3 :: Matrix Double) @@>(0,0)) 694 time "subVector-join 3" (f (ident 3 :: Matrix Double) `atIndex` (0,0))
702 time "subVector-join 10" (f (ident 10 :: Matrix Double) @@>(0,0)) 695 time "subVector-join 10" (f (ident 10 :: Matrix Double) `atIndex` (0,0))
703 696
704-------------------------------- 697--------------------------------
705 698
@@ -724,7 +717,7 @@ multBench = do
724 717
725eigBench = do 718eigBench = do
726 let m = reshape 1000 (randomVector 777 Uniform (1000*1000)) 719 let m = reshape 1000 (randomVector 777 Uniform (1000*1000))
727 s = m + trans m 720 s = m + tr m
728 m `seq` s `seq` putStrLn "" 721 m `seq` s `seq` putStrLn ""
729 time "eigenvalues symmetric 1000x1000" (eigenvaluesSH' m) 722 time "eigenvalues symmetric 1000x1000" (eigenvaluesSH' m)
730 time "eigenvectors symmetric 1000x1000" (snd $ eigSH' m) 723 time "eigenvectors symmetric 1000x1000" (snd $ eigSH' m)
@@ -736,7 +729,7 @@ eigBench = do
736svdBench = do 729svdBench = do
737 let a = reshape 500 (randomVector 777 Uniform (3000*500)) 730 let a = reshape 500 (randomVector 777 Uniform (3000*500))
738 b = reshape 1000 (randomVector 777 Uniform (1000*1000)) 731 b = reshape 1000 (randomVector 777 Uniform (1000*1000))
739 fv (_,_,v) = v@@>(0,0) 732 fv (_,_,v) = v `atIndex` (0,0)
740 a `seq` b `seq` putStrLn "" 733 a `seq` b `seq` putStrLn ""
741 time "singular values 3000x500" (singularValues a) 734 time "singular values 3000x500" (singularValues a)
742 time "thin svd 3000x500" (fv $ thinSVD a) 735 time "thin svd 3000x500" (fv $ thinSVD a)
@@ -748,7 +741,7 @@ svdBench = do
748 741
749solveBenchN n = do 742solveBenchN n = do
750 let x = uniformSample 777 (2*n) (replicate n (-1,1)) 743 let x = uniformSample 777 (2*n) (replicate n (-1,1))
751 a = trans x <> x 744 a = tr x <> x
752 b = asColumn $ randomVector 666 Uniform n 745 b = asColumn $ randomVector 666 Uniform n
753 a `seq` b `seq` putStrLn "" 746 a `seq` b `seq` putStrLn ""
754 time ("svd solve " ++ show n) (linearSolveSVD a b) 747 time ("svd solve " ++ show n) (linearSolveSVD a b)
@@ -765,7 +758,7 @@ solveBench = do
765 758
766cholBenchN n = do 759cholBenchN n = do
767 let x = uniformSample 777 (2*n) (replicate n (-1,1)) 760 let x = uniformSample 777 (2*n) (replicate n (-1,1))
768 a = trans x <> x 761 a = tr x <> x
769 a `seq` putStr "" 762 a `seq` putStr ""
770 time ("chol " ++ show n) (chol a) 763 time ("chol " ++ show n) (chol a)
771 764
diff --git a/packages/tests/src/Numeric/LinearAlgebra/Tests/Instances.hs b/packages/tests/src/Numeric/LinearAlgebra/Tests/Instances.hs
index 53fc4d2..e2c3840 100644
--- a/packages/tests/src/Numeric/LinearAlgebra/Tests/Instances.hs
+++ b/packages/tests/src/Numeric/LinearAlgebra/Tests/Instances.hs
@@ -26,9 +26,8 @@ module Numeric.LinearAlgebra.Tests.Instances(
26 26
27import System.Random 27import System.Random
28 28
29import Numeric.LinearAlgebra 29import Numeric.LinearAlgebra.HMatrix hiding (vector)
30import Numeric.LinearAlgebra.Devel 30import Numeric.LinearAlgebra.Devel
31import Numeric.Container
32import Control.Monad(replicateM) 31import Control.Monad(replicateM)
33import Test.QuickCheck(Arbitrary,arbitrary,coarbitrary,choose,vector 32import Test.QuickCheck(Arbitrary,arbitrary,coarbitrary,choose,vector
34 ,sized,classify,Testable,Property 33 ,sized,classify,Testable,Property
@@ -130,7 +129,7 @@ instance (Field a, Arbitrary a, Num (Vector a)) => Arbitrary (Her a) where
130 arbitrary = do 129 arbitrary = do
131 Sq m <- arbitrary 130 Sq m <- arbitrary
132 let m' = m/2 131 let m' = m/2
133 return $ Her (m' + ctrans m') 132 return $ Her (m' + tr m')
134 133
135#if MIN_VERSION_QuickCheck(2,0,0) 134#if MIN_VERSION_QuickCheck(2,0,0)
136#else 135#else
@@ -144,7 +143,7 @@ instance ArbitraryField (Complex Double)
144 143
145-- a well-conditioned general matrix (the singular values are between 1 and 100) 144-- a well-conditioned general matrix (the singular values are between 1 and 100)
146newtype (WC a) = WC (Matrix a) deriving Show 145newtype (WC a) = WC (Matrix a) deriving Show
147instance (ArbitraryField a) => Arbitrary (WC a) where 146instance (Numeric a, ArbitraryField a) => Arbitrary (WC a) where
148 arbitrary = do 147 arbitrary = do
149 m <- arbitrary 148 m <- arbitrary
150 let (u,_,v) = svd m 149 let (u,_,v) = svd m
@@ -153,7 +152,7 @@ instance (ArbitraryField a) => Arbitrary (WC a) where
153 n = min r c 152 n = min r c
154 sv' <- replicateM n (choose (1,100)) 153 sv' <- replicateM n (choose (1,100))
155 let s = diagRect 0 (fromList sv') r c 154 let s = diagRect 0 (fromList sv') r c
156 return $ WC (u `mXm` real s `mXm` trans v) 155 return $ WC (u <> real s <> tr v)
157 156
158#if MIN_VERSION_QuickCheck(2,0,0) 157#if MIN_VERSION_QuickCheck(2,0,0)
159#else 158#else
@@ -163,14 +162,14 @@ instance (ArbitraryField a) => Arbitrary (WC a) where
163 162
164-- a well-conditioned square matrix (the singular values are between 1 and 100) 163-- a well-conditioned square matrix (the singular values are between 1 and 100)
165newtype (SqWC a) = SqWC (Matrix a) deriving Show 164newtype (SqWC a) = SqWC (Matrix a) deriving Show
166instance (ArbitraryField a) => Arbitrary (SqWC a) where 165instance (ArbitraryField a, Numeric a) => Arbitrary (SqWC a) where
167 arbitrary = do 166 arbitrary = do
168 Sq m <- arbitrary 167 Sq m <- arbitrary
169 let (u,_,v) = svd m 168 let (u,_,v) = svd m
170 n = rows m 169 n = rows m
171 sv' <- replicateM n (choose (1,100)) 170 sv' <- replicateM n (choose (1,100))
172 let s = diag (fromList sv') 171 let s = diag (fromList sv')
173 return $ SqWC (u `mXm` real s `mXm` trans v) 172 return $ SqWC (u <> real s <> tr v)
174 173
175#if MIN_VERSION_QuickCheck(2,0,0) 174#if MIN_VERSION_QuickCheck(2,0,0)
176#else 175#else
@@ -180,7 +179,7 @@ instance (ArbitraryField a) => Arbitrary (SqWC a) where
180 179
181-- a positive definite square matrix (the eigenvalues are between 0 and 100) 180-- a positive definite square matrix (the eigenvalues are between 0 and 100)
182newtype (PosDef a) = PosDef (Matrix a) deriving Show 181newtype (PosDef a) = PosDef (Matrix a) deriving Show
183instance (ArbitraryField a, Num (Vector a)) 182instance (Numeric a, ArbitraryField a, Num (Vector a))
184 => Arbitrary (PosDef a) where 183 => Arbitrary (PosDef a) where
185 arbitrary = do 184 arbitrary = do
186 Her m <- arbitrary 185 Her m <- arbitrary
@@ -188,8 +187,8 @@ instance (ArbitraryField a, Num (Vector a))
188 n = rows m 187 n = rows m
189 l <- replicateM n (choose (0,100)) 188 l <- replicateM n (choose (0,100))
190 let s = diag (fromList l) 189 let s = diag (fromList l)
191 p = v `mXm` real s `mXm` ctrans v 190 p = v <> real s <> tr v
192 return $ PosDef (0.5 * p + 0.5 * ctrans p) 191 return $ PosDef (0.5 * p + 0.5 * tr p)
193 192
194#if MIN_VERSION_QuickCheck(2,0,0) 193#if MIN_VERSION_QuickCheck(2,0,0)
195#else 194#else
diff --git a/packages/tests/src/Numeric/LinearAlgebra/Tests/Properties.hs b/packages/tests/src/Numeric/LinearAlgebra/Tests/Properties.hs
index a5c37f4..d9645c3 100644
--- a/packages/tests/src/Numeric/LinearAlgebra/Tests/Properties.hs
+++ b/packages/tests/src/Numeric/LinearAlgebra/Tests/Properties.hs
@@ -1,6 +1,6 @@
1{-# LANGUAGE CPP, FlexibleContexts #-} 1{-# LANGUAGE CPP, FlexibleContexts #-}
2{-# OPTIONS_GHC -fno-warn-unused-imports #-} 2{-# OPTIONS_GHC -fno-warn-unused-imports #-}
3{-# LANGUAGE TypeFamilies #-} 3{-# LANGUAGE GADTs #-}
4 4
5----------------------------------------------------------------------------- 5-----------------------------------------------------------------------------
6{- | 6{- |
@@ -29,7 +29,7 @@ module Numeric.LinearAlgebra.Tests.Properties (
29 pinvProp, 29 pinvProp,
30 detProp, 30 detProp,
31 nullspaceProp, 31 nullspaceProp,
32 bugProp, 32-- bugProp,
33 svdProp1, svdProp1a, svdProp1b, svdProp2, svdProp3, svdProp4, 33 svdProp1, svdProp1a, svdProp1b, svdProp2, svdProp3, svdProp4,
34 svdProp5a, svdProp5b, svdProp6a, svdProp6b, svdProp7, 34 svdProp5a, svdProp5b, svdProp6a, svdProp6b, svdProp7,
35 eigProp, eigSHProp, eigProp2, eigSHProp2, 35 eigProp, eigSHProp, eigProp2, eigSHProp2,
@@ -43,9 +43,7 @@ module Numeric.LinearAlgebra.Tests.Properties (
43 linearSolveProp, linearSolveProp2 43 linearSolveProp, linearSolveProp2
44) where 44) where
45 45
46import Numeric.Container 46import Numeric.LinearAlgebra.HMatrix hiding (Testable)--hiding (real,complex)
47import Numeric.LinearAlgebra --hiding (real,complex)
48import Numeric.LinearAlgebra.LAPACK
49import Debug.Trace 47import Debug.Trace
50import Test.QuickCheck(Arbitrary,arbitrary,coarbitrary,choose,vector 48import Test.QuickCheck(Arbitrary,arbitrary,coarbitrary,choose,vector
51 ,sized,classify,Testable,Property 49 ,sized,classify,Testable,Property
@@ -55,8 +53,8 @@ trivial :: Testable a => Bool -> a -> Property
55trivial = (`classify` "trivial") 53trivial = (`classify` "trivial")
56 54
57-- relative error 55-- relative error
58dist :: (Normed c t, Num (c t)) => c t -> c t -> Double 56dist :: (Num a, Normed a) => a -> a -> Double
59dist = relativeError Infinity 57dist = relativeError norm_Inf
60 58
61infixl 4 |~| 59infixl 4 |~|
62a |~| b = a :~10~: b 60a |~| b = a :~10~: b
@@ -73,11 +71,11 @@ a :~n~: b = dist a b < 10^^(-n)
73square m = rows m == cols m 71square m = rows m == cols m
74 72
75-- orthonormal columns 73-- orthonormal columns
76orthonormal m = ctrans m <> m |~| ident (cols m) 74orthonormal m = tr m <> m |~| ident (cols m)
77 75
78unitary m = square m && orthonormal m 76unitary m = square m && orthonormal m
79 77
80hermitian m = square m && m |~| ctrans m 78hermitian m = square m && m |~| tr m
81 79
82wellCond m = rcond m > 1/100 80wellCond m = rcond m > 1/100
83 81
@@ -85,12 +83,12 @@ positiveDefinite m = minimum (toList e) > 0
85 where (e,_v) = eigSH m 83 where (e,_v) = eigSH m
86 84
87upperTriang m = rows m == 1 || down == z 85upperTriang m = rows m == 1 || down == z
88 where down = fromList $ concat $ zipWith drop [1..] (toLists (ctrans m)) 86 where down = fromList $ concat $ zipWith drop [1..] (toLists (tr m))
89 z = konst 0 (dim down) 87 z = konst 0 (size down)
90 88
91upperHessenberg m = rows m < 3 || down == z 89upperHessenberg m = rows m < 3 || down == z
92 where down = fromList $ concat $ zipWith drop [2..] (toLists (ctrans m)) 90 where down = fromList $ concat $ zipWith drop [2..] (toLists (tr m))
93 z = konst 0 (dim down) 91 z = konst 0 (size down)
94 92
95zeros (r,c) = reshape c (konst 0 (r*c)) 93zeros (r,c) = reshape c (konst 0 (r*c))
96 94
@@ -118,81 +116,94 @@ detProp m = s d1 |~| s d2
118 s x = fromList [x] 116 s x = fromList [x]
119 117
120nullspaceProp m = null nl `trivial` (null nl || m <> n |~| zeros (r,c) 118nullspaceProp m = null nl `trivial` (null nl || m <> n |~| zeros (r,c)
121 && orthonormal (fromColumns nl)) 119 && orthonormal n)
122 where nl = nullspacePrec 1 m 120 where n = nullspaceSVD (Left (1*peps)) m (rightSV m)
123 n = fromColumns nl 121 nl = toColumns n
124 r = rows m 122 r = rows m
125 c = cols m - rank m 123 c = cols m - rank m
126 124
127------------------------------------------------------------------ 125------------------------------------------------------------------
128 126{-
129-- testcase for nonempty fpu stack 127-- testcase for nonempty fpu stack
130-- uncommenting unitary' signature eliminates the problem 128-- uncommenting unitary' signature eliminates the problem
131bugProp m = m |~| u <> real d <> trans v && unitary' u && unitary' v 129bugProp m = m |~| u <> real d <> tr v && unitary' u && unitary' v
132 where (u,d,v) = fullSVD m 130 where (u,d,v) = svd m
133 -- unitary' :: (Num (Vector t), Field t) => Matrix t -> Bool 131 -- unitary' :: (Num (Vector t), Field t) => Matrix t -> Bool
134 unitary' a = unitary a 132 unitary' a = unitary a
135 133-}
136------------------------------------------------------------------ 134------------------------------------------------------------------
137 135
138-- fullSVD 136-- fullSVD
139svdProp1 m = m |~| u <> real d <> trans v && unitary u && unitary v 137svdProp1 m = m |~| u <> real d <> tr v && unitary u && unitary v
140 where (u,d,v) = fullSVD m 138 where
139 (u,s,v) = svd m
140 d = diagRect 0 s (rows m) (cols m)
141 141
142svdProp1a svdfun m = m |~| u <> real d <> trans v && unitary u && unitary v where 142svdProp1a svdfun m = m |~| u <> real d <> tr v && unitary u && unitary v
143 where
143 (u,s,v) = svdfun m 144 (u,s,v) = svdfun m
144 d = diagRect 0 s (rows m) (cols m) 145 d = diagRect 0 s (rows m) (cols m)
145 146
146svdProp1b svdfun m = unitary u && unitary v where 147svdProp1b svdfun m = unitary u && unitary v
148 where
147 (u,_,v) = svdfun m 149 (u,_,v) = svdfun m
148 150
149-- thinSVD 151-- thinSVD
150svdProp2 thinSVDfun m = m |~| u <> diag (real s) <> trans v && orthonormal u && orthonormal v && dim s == min (rows m) (cols m) 152svdProp2 thinSVDfun m
151 where (u,s,v) = thinSVDfun m 153 = m |~| u <> diag (real s) <> tr v
154 && orthonormal u && orthonormal v
155 && size s == min (rows m) (cols m)
156 where
157 (u,s,v) = thinSVDfun m
152 158
153-- compactSVD 159-- compactSVD
154svdProp3 m = (m |~| u <> real (diag s) <> trans v 160svdProp3 m = (m |~| u <> real (diag s) <> tr v
155 && orthonormal u && orthonormal v) 161 && orthonormal u && orthonormal v)
156 where (u,s,v) = compactSVD m 162 where
163 (u,s,v) = compactSVD m
157 164
158svdProp4 m' = m |~| u <> real (diag s) <> trans v 165svdProp4 m' = m |~| u <> real (diag s) <> tr v
159 && orthonormal u && orthonormal v 166 && orthonormal u && orthonormal v
160 && (dim s == r || r == 0 && dim s == 1) 167 && (size s == r || r == 0 && size s == 1)
161 where (u,s,v) = compactSVD m 168 where
162 m = fromBlocks [[m'],[m']] 169 (u,s,v) = compactSVD m
163 r = rank m' 170 m = fromBlocks [[m'],[m']]
164 171 r = rank m'
165svdProp5a m = all (s1|~|) [s2,s3,s4,s5,s6] where 172
166 s1 = svR m 173svdProp5a m = all (s1|~|) [s3,s5] where
167 s2 = svRd m 174 s1 = singularValues (m :: Matrix Double)
168 (_,s3,_) = svdR m 175-- s2 = svRd m
169 (_,s4,_) = svdRd m 176 (_,s3,_) = svd m
170 (_,s5,_) = thinSVDR m 177-- (_,s4,_) = svdRd m
171 (_,s6,_) = thinSVDRd m 178 (_,s5,_) = thinSVD m
172 179-- (_,s6,_) = thinSVDRd m
173svdProp5b m = all (s1|~|) [s2,s3,s4,s5,s6] where 180
174 s1 = svC m 181svdProp5b m = all (s1|~|) [s3,s5] where
175 s2 = svCd m 182 s1 = singularValues (m :: Matrix (Complex Double))
176 (_,s3,_) = svdC m 183-- s2 = svCd m
177 (_,s4,_) = svdCd m 184 (_,s3,_) = svd m
178 (_,s5,_) = thinSVDC m 185-- (_,s4,_) = svdCd m
179 (_,s6,_) = thinSVDCd m 186 (_,s5,_) = thinSVD m
187-- (_,s6,_) = thinSVDCd m
180 188
181svdProp6a m = s |~| s' && v |~| v' && s |~| s'' && u |~| u' 189svdProp6a m = s |~| s' && v |~| v' && s |~| s'' && u |~| u'
182 where (u,s,v) = svdR m 190 where
183 (s',v') = rightSVR m 191 (u,s,v) = svd (m :: Matrix Double)
184 (u',s'') = leftSVR m 192 (s',v') = rightSV m
193 (u',s'') = leftSV m
185 194
186svdProp6b m = s |~| s' && v |~| v' && s |~| s'' && u |~| u' 195svdProp6b m = s |~| s' && v |~| v' && s |~| s'' && u |~| u'
187 where (u,s,v) = svdC m 196 where
188 (s',v') = rightSVC m 197 (u,s,v) = svd (m :: Matrix (Complex Double))
189 (u',s'') = leftSVC m 198 (s',v') = rightSV m
199 (u',s'') = leftSV m
190 200
191svdProp7 m = s |~| s' && u |~| u' && v |~| v' && s |~| s''' 201svdProp7 m = s |~| s' && u |~| u' && v |~| v' && s |~| s'''
192 where (u,s,v) = svd m 202 where
193 (s',v') = rightSV m 203 (u,s,v) = svd m
194 (u',_s'') = leftSV m 204 (s',v') = rightSV m
195 s''' = singularValues m 205 (u',_s'') = leftSV m
206 s''' = singularValues m
196 207
197------------------------------------------------------------------ 208------------------------------------------------------------------
198 209
@@ -201,7 +212,7 @@ eigProp m = complex m <> v |~| v <> diag s
201 212
202eigSHProp m = m <> v |~| v <> real (diag s) 213eigSHProp m = m <> v |~| v <> real (diag s)
203 && unitary v 214 && unitary v
204 && m |~| v <> real (diag s) <> ctrans v 215 && m |~| v <> real (diag s) <> tr v
205 where (s, v) = eigSH m 216 where (s, v) = eigSH m
206 217
207eigProp2 m = fst (eig m) |~| eigenvalues m 218eigProp2 m = fst (eig m) |~| eigenvalues m
@@ -226,19 +237,19 @@ rqProp3 m = upperTriang' r
226 where (r,_q) = rq m 237 where (r,_q) = rq m
227 238
228upperTriang' r = upptr (rows r) (cols r) * r |~| r 239upperTriang' r = upptr (rows r) (cols r) * r |~| r
229 where upptr f c = buildMatrix f c $ \(r',c') -> if r'-t > c' then 0 else 1 240 where upptr f c = build (f,c) $ \r' c' -> if r'-t > c' then 0 else 1
230 where t = f-c 241 where t = fromIntegral (f-c)
231 242
232hessProp m = m |~| p <> h <> ctrans p && unitary p && upperHessenberg h 243hessProp m = m |~| p <> h <> tr p && unitary p && upperHessenberg h
233 where (p,h) = hess m 244 where (p,h) = hess m
234 245
235schurProp1 m = m |~| u <> s <> ctrans u && unitary u && upperTriang s 246schurProp1 m = m |~| u <> s <> tr u && unitary u && upperTriang s
236 where (u,s) = schur m 247 where (u,s) = schur m
237 248
238schurProp2 m = m |~| u <> s <> ctrans u && unitary u && upperHessenberg s -- fixme 249schurProp2 m = m |~| u <> s <> tr u && unitary u && upperHessenberg s -- fixme
239 where (u,s) = schur m 250 where (u,s) = schur m
240 251
241cholProp m = m |~| ctrans c <> c && upperTriang c 252cholProp m = m |~| tr c <> c && upperTriang c
242 where c = chol m 253 where c = chol m
243 254
244exactProp m = chol m == chol (m+0) 255exactProp m = chol m == chol (m+0)
@@ -252,7 +263,7 @@ mulH a b = fromLists [[ doth ai bj | bj <- toColumns b] | ai <- toRows a ]
252 263
253multProp1 p (a,b) = (a <> b) :~p~: (mulH a b) 264multProp1 p (a,b) = (a <> b) :~p~: (mulH a b)
254 265
255multProp2 p (a,b) = (ctrans (a <> b)) :~p~: (ctrans b <> ctrans a) 266multProp2 p (a,b) = (tr (a <> b)) :~p~: (tr b <> tr a)
256 267
257linearSolveProp f m = f m m |~| ident (rows m) 268linearSolveProp f m = f m m |~| ident (rows m)
258 269
@@ -261,5 +272,5 @@ linearSolveProp2 f (a,x) = not wc `trivial` (not wc || a <> f a b |~| b)
261 b = a <> x 272 b = a <> x
262 wc = rank a == q 273 wc = rank a == q
263 274
264subProp m = m == (trans . fromColumns . toRows) m 275subProp m = m == (tr . fromColumns . toRows) m
265 276