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-rw-r--r--packages/base/src/Internal/C/lapack-aux.c2
-rw-r--r--packages/base/src/Internal/C/vector-aux.c8
-rw-r--r--packages/base/src/Internal/Modular.hs136
-rw-r--r--packages/base/src/Internal/Numeric.hs4
-rw-r--r--packages/base/src/Numeric/LinearAlgebra.hs2
-rw-r--r--packages/base/src/Numeric/LinearAlgebra/Data.hs2
-rw-r--r--packages/tests/src/Numeric/LinearAlgebra/Tests.hs2
7 files changed, 108 insertions, 48 deletions
diff --git a/packages/base/src/Internal/C/lapack-aux.c b/packages/base/src/Internal/C/lapack-aux.c
index 1601bef..dcce1c5 100644
--- a/packages/base/src/Internal/C/lapack-aux.c
+++ b/packages/base/src/Internal/C/lapack-aux.c
@@ -1308,7 +1308,7 @@ int multiplyQ(int ta, int tb, KQMAT(a),KQMAT(b),QMAT(r)) {
1308 } OK } 1308 } OK }
1309 1309
1310int multiplyI(int m, KOIMAT(a), KOIMAT(b), OIMAT(r)) MULT_IMP 1310int multiplyI(int m, KOIMAT(a), KOIMAT(b), OIMAT(r)) MULT_IMP
1311int multiplyL(int32_t m, KOLMAT(a), KOLMAT(b), OLMAT(r)) MULT_IMP 1311int multiplyL(int64_t m, KOLMAT(a), KOLMAT(b), OLMAT(r)) MULT_IMP
1312 1312
1313 1313
1314////////////////// sparse matrix-product /////////////////////////////////////// 1314////////////////// sparse matrix-product ///////////////////////////////////////
diff --git a/packages/base/src/Internal/C/vector-aux.c b/packages/base/src/Internal/C/vector-aux.c
index 580aa1c..c161556 100644
--- a/packages/base/src/Internal/C/vector-aux.c
+++ b/packages/base/src/Internal/C/vector-aux.c
@@ -71,7 +71,7 @@ int sumI(int m, KIVEC(x),IVEC(r)) {
71 OK 71 OK
72} 72}
73 73
74int sumL(int32_t m, KLVEC(x),LVEC(r)) { 74int sumL(int64_t m, KLVEC(x),LVEC(r)) {
75 REQUIRES(rn==1,BAD_SIZE); 75 REQUIRES(rn==1,BAD_SIZE);
76 int i; 76 int i;
77 int res = 0; 77 int res = 0;
@@ -148,7 +148,7 @@ int prodI(int m, KIVEC(x),IVEC(r)) {
148 OK 148 OK
149} 149}
150 150
151int prodL(int32_t m, KLVEC(x),LVEC(r)) { 151int prodL(int64_t m, KLVEC(x),LVEC(r)) {
152 REQUIRES(rn==1,BAD_SIZE); 152 REQUIRES(rn==1,BAD_SIZE);
153 int i; 153 int i;
154 int res = 1; 154 int res = 1;
@@ -761,8 +761,8 @@ int mapValL(int code, int64_t* pval, KLVEC(x), LVEC(r)) {
761 OPV(1,val/xp[k]) 761 OPV(1,val/xp[k])
762 OPV(2,val+xp[k]) 762 OPV(2,val+xp[k])
763 OPV(3,val-xp[k]) 763 OPV(3,val-xp[k])
764 OPV(6,mod(val,xp[k])) 764 OPV(6,mod_l(val,xp[k]))
765 OPV(7,mod(xp[k],val)) 765 OPV(7,mod_l(xp[k],val))
766 default: ERROR(BAD_CODE); 766 default: ERROR(BAD_CODE);
767 } 767 }
768} 768}
diff --git a/packages/base/src/Internal/Modular.hs b/packages/base/src/Internal/Modular.hs
index 0274607..6b34010 100644
--- a/packages/base/src/Internal/Modular.hs
+++ b/packages/base/src/Internal/Modular.hs
@@ -7,6 +7,7 @@
7{-# LANGUAGE ScopedTypeVariables #-} 7{-# LANGUAGE ScopedTypeVariables #-}
8{-# LANGUAGE Rank2Types #-} 8{-# LANGUAGE Rank2Types #-}
9{-# LANGUAGE FlexibleInstances #-} 9{-# LANGUAGE FlexibleInstances #-}
10{-# LANGUAGE UndecidableInstances #-}
10{-# LANGUAGE GADTs #-} 11{-# LANGUAGE GADTs #-}
11{-# LANGUAGE TypeFamilies #-} 12{-# LANGUAGE TypeFamilies #-}
12 13
@@ -22,7 +23,7 @@ Proof of concept of statically checked modular arithmetic.
22-} 23-}
23 24
24module Internal.Modular( 25module Internal.Modular(
25 Mod, F 26 Mod
26) where 27) where
27 28
28import Internal.Vector 29import Internal.Vector
@@ -30,8 +31,8 @@ import Internal.Matrix hiding (mat,size)
30import Internal.Numeric 31import Internal.Numeric
31import Internal.Element 32import Internal.Element
32import Internal.Container 33import Internal.Container
33import Internal.Vectorized (prodI,sumI) 34import Internal.Vectorized (prodI,sumI,prodL,sumL)
34import Internal.LAPACK (multiplyI) 35import Internal.LAPACK (multiplyI, multiplyL)
35import Internal.Util(Indexable(..),gaussElim) 36import Internal.Util(Indexable(..),gaussElim)
36import GHC.TypeLits 37import GHC.TypeLits
37import Data.Proxy(Proxy) 38import Data.Proxy(Proxy)
@@ -45,24 +46,24 @@ import Data.Ratio
45newtype Mod (n :: Nat) t = Mod {unMod:: t} 46newtype Mod (n :: Nat) t = Mod {unMod:: t}
46 deriving (Storable) 47 deriving (Storable)
47 48
48instance KnownNat m => Enum (F m) 49instance (Integral t, Enum t, KnownNat m) => Enum (Mod m t)
49 where 50 where
50 toEnum = l0 (\m x -> fromIntegral $ x `mod` (fromIntegral m)) 51 toEnum = l0 (\m x -> fromIntegral $ x `mod` (fromIntegral m))
51 fromEnum = fromIntegral . unMod 52 fromEnum = fromIntegral . unMod
52 53
53instance KnownNat m => Eq (F m) 54instance (Eq t, KnownNat m) => Eq (Mod m t)
54 where 55 where
55 a == b = (unMod a) == (unMod b) 56 a == b = (unMod a) == (unMod b)
56 57
57instance KnownNat m => Ord (F m) 58instance (Ord t, KnownNat m) => Ord (Mod m t)
58 where 59 where
59 compare a b = compare (unMod a) (unMod b) 60 compare a b = compare (unMod a) (unMod b)
60 61
61instance KnownNat m => Real (F m) 62instance (Real t, KnownNat m, Integral (Mod m t)) => Real (Mod m t)
62 where 63 where
63 toRational x = toInteger x % 1 64 toRational x = toInteger x % 1
64 65
65instance KnownNat m => Integral (F m) 66instance (Integral t, KnownNat m, Num (Mod m t)) => Integral (Mod m t)
66 where 67 where
67 toInteger = toInteger . unMod 68 toInteger = toInteger . unMod
68 quotRem a b = (Mod q, Mod r) 69 quotRem a b = (Mod q, Mod r)
@@ -70,7 +71,7 @@ instance KnownNat m => Integral (F m)
70 (q,r) = quotRem (unMod a) (unMod b) 71 (q,r) = quotRem (unMod a) (unMod b)
71 72
72-- | this instance is only valid for prime m 73-- | this instance is only valid for prime m
73instance KnownNat m => Fractional (F m) 74instance (Show (Mod m t), Num (Mod m t), Eq t, KnownNat m) => Fractional (Mod m t)
74 where 75 where
75 recip x 76 recip x
76 | x*r == 1 = r 77 | x*r == 1 = r
@@ -80,27 +81,27 @@ instance KnownNat m => Fractional (F m)
80 m' = fromIntegral . natVal $ (undefined :: Proxy m) 81 m' = fromIntegral . natVal $ (undefined :: Proxy m)
81 fromRational x = fromInteger (numerator x) / fromInteger (denominator x) 82 fromRational x = fromInteger (numerator x) / fromInteger (denominator x)
82 83
83l2 :: forall m a b c. (KnownNat m) => (Int -> a -> b -> c) -> Mod m a -> Mod m b -> Mod m c 84l2 :: forall m a b c. (Num c, KnownNat m) => (c -> a -> b -> c) -> Mod m a -> Mod m b -> Mod m c
84l2 f (Mod u) (Mod v) = Mod (f m' u v) 85l2 f (Mod u) (Mod v) = Mod (f m' u v)
85 where 86 where
86 m' = fromIntegral . natVal $ (undefined :: Proxy m) 87 m' = fromIntegral . natVal $ (undefined :: Proxy m)
87 88
88l1 :: forall m a b . (KnownNat m) => (Int -> a -> b) -> Mod m a -> Mod m b 89l1 :: forall m a b . (Num b, KnownNat m) => (b -> a -> b) -> Mod m a -> Mod m b
89l1 f (Mod u) = Mod (f m' u) 90l1 f (Mod u) = Mod (f m' u)
90 where 91 where
91 m' = fromIntegral . natVal $ (undefined :: Proxy m) 92 m' = fromIntegral . natVal $ (undefined :: Proxy m)
92 93
93l0 :: forall m a b . (KnownNat m) => (Int -> a -> b) -> a -> Mod m b 94l0 :: forall m a b . (Num b, KnownNat m) => (b -> a -> b) -> a -> Mod m b
94l0 f u = Mod (f m' u) 95l0 f u = Mod (f m' u)
95 where 96 where
96 m' = fromIntegral . natVal $ (undefined :: Proxy m) 97 m' = fromIntegral . natVal $ (undefined :: Proxy m)
97 98
98 99
99instance Show (F n) 100instance Show t => Show (Mod n t)
100 where 101 where
101 show = show . unMod 102 show = show . unMod
102 103
103instance forall n . KnownNat n => Num (F n) 104instance forall n t . (Integral t, KnownNat n) => Num (Mod n t)
104 where 105 where
105 (+) = l2 (\m a b -> (a + b) `mod` (fromIntegral m)) 106 (+) = l2 (\m a b -> (a + b) `mod` (fromIntegral m))
106 (*) = l2 (\m a b -> (a * b) `mod` (fromIntegral m)) 107 (*) = l2 (\m a b -> (a * b) `mod` (fromIntegral m))
@@ -110,14 +111,8 @@ instance forall n . KnownNat n => Num (F n)
110 fromInteger = l0 (\m x -> fromInteger x `mod` (fromIntegral m)) 111 fromInteger = l0 (\m x -> fromInteger x `mod` (fromIntegral m))
111 112
112 113
113-- | Integer modulo n
114type F n = Mod n I
115 114
116type V n = Vector (F n) 115instance (Ord t, Element t) => Element (Mod n t)
117type M n = Matrix (F n)
118
119
120instance Element (F n)
121 where 116 where
122 transdata n v m = i2f (transdata n (f2i v) m) 117 transdata n v m = i2f (transdata n (f2i v) m)
123 constantD x n = i2f (constantD (unMod x) n) 118 constantD x n = i2f (constantD (unMod x) n)
@@ -128,7 +123,8 @@ instance Element (F n)
128 selectV c l e g = i2f (selectV c (f2i l) (f2i e) (f2i g)) 123 selectV c l e g = i2f (selectV c (f2i l) (f2i e) (f2i g))
129 remapM i j m = i2fM (remap i j (f2iM m)) 124 remapM i j m = i2fM (remap i j (f2iM m))
130 125
131instance forall m . KnownNat m => Container Vector (F m) 126
127instance forall m . KnownNat m => Container Vector (Mod m I)
132 where 128 where
133 conj' = id 129 conj' = id
134 size' = dim 130 size' = dim
@@ -168,24 +164,77 @@ instance forall m . KnownNat m => Container Vector (F m)
168 fromZ' = vmod . fromZ' 164 fromZ' = vmod . fromZ'
169 toZ' = toZ' . f2i 165 toZ' = toZ' . f2i
170 166
167instance forall m . KnownNat m => Container Vector (Mod m Z)
168 where
169 conj' = id
170 size' = dim
171 scale' s x = vmod (scale (unMod s) (f2i x))
172 addConstant c x = vmod (addConstant (unMod c) (f2i x))
173 add a b = vmod (add (f2i a) (f2i b))
174 sub a b = vmod (sub (f2i a) (f2i b))
175 mul a b = vmod (mul (f2i a) (f2i b))
176 equal u v = equal (f2i u) (f2i v)
177 scalar' x = fromList [x]
178 konst' x = i2f . konst (unMod x)
179 build' n f = build n (fromIntegral . f)
180 cmap' = cmap
181 atIndex' x k = fromIntegral (atIndex (f2i x) k)
182 minIndex' = minIndex . f2i
183 maxIndex' = maxIndex . f2i
184 minElement' = Mod . minElement . f2i
185 maxElement' = Mod . maxElement . f2i
186 sumElements' = fromIntegral . sumL m' . f2i
187 where
188 m' = fromIntegral . natVal $ (undefined :: Proxy m)
189 prodElements' = fromIntegral . prodL m' . f2i
190 where
191 m' = fromIntegral . natVal $ (undefined :: Proxy m)
192 step' = i2f . step . f2i
193 find' = findV
194 assoc' = assocV
195 accum' = accumV
196 ccompare' a b = ccompare (f2i a) (f2i b)
197 cselect' c l e g = i2f $ cselect c (f2i l) (f2i e) (f2i g)
198 scaleRecip s x = scale' s (cmap recip x)
199 divide x y = mul x (cmap recip y)
200 arctan2' = undefined
201 cmod' m = vmod . cmod' (unMod m) . f2i
202 fromInt' = vmod . fromInt'
203 toInt' = toInt . f2i
204 fromZ' = vmod
205 toZ' = f2i
206
207
171 208
172instance Indexable (Vector (F m)) (F m) 209instance (Storable t, Indexable (Vector t) t) => Indexable (Vector (Mod m t)) (Mod m t)
173 where 210 where
174 (!) = (@>) 211 (!) = (@>)
175 212
176 213
177type instance RealOf (F n) = I 214type instance RealOf (Mod n I) = I
215type instance RealOf (Mod n Z) = Z
178 216
179instance KnownNat m => Product (F m) where 217instance KnownNat m => Product (Mod m I) where
180 norm2 = undefined 218 norm2 = undefined
181 absSum = undefined 219 absSum = undefined
182 norm1 = undefined 220 norm1 = undefined
183 normInf = undefined 221 normInf = undefined
184 multiply = lift2 (multiplyI m') 222 multiply = lift2m (multiplyI m')
223 where
224 m' = fromIntegral . natVal $ (undefined :: Proxy m)
225
226instance KnownNat m => Product (Mod m Z) where
227 norm2 = undefined
228 absSum = undefined
229 norm1 = undefined
230 normInf = undefined
231 multiply = lift2m (multiplyL m')
185 where 232 where
186 m' = fromIntegral . natVal $ (undefined :: Proxy m) 233 m' = fromIntegral . natVal $ (undefined :: Proxy m)
187 234
188instance KnownNat m => Numeric (F m) 235
236instance KnownNat m => Numeric (Mod m I)
237instance KnownNat m => Numeric (Mod m Z)
189 238
190i2f :: Storable t => Vector t -> Vector (Mod n t) 239i2f :: Storable t => Vector t -> Vector (Mod n t)
191i2f v = unsafeFromForeignPtr (castForeignPtr fp) (i) (n) 240i2f v = unsafeFromForeignPtr (castForeignPtr fp) (i) (n)
@@ -206,10 +255,12 @@ vmod = i2f . cmod' m'
206 where 255 where
207 m' = fromIntegral . natVal $ (undefined :: Proxy m) 256 m' = fromIntegral . natVal $ (undefined :: Proxy m)
208 257
209lift1 f a = fromInt (f (toInt a)) 258lift1 f a = vmod (f (f2i a))
210lift2 f a b = fromInt (f (toInt a) (toInt b)) 259lift2 f a b = vmod (f (f2i a) (f2i b))
260
261lift2m f a b = liftMatrix vmod (f (f2iM a) (f2iM b))
211 262
212instance forall m . KnownNat m => Num (V m) 263instance forall m . KnownNat m => Num (Vector (Mod m I))
213 where 264 where
214 (+) = lift2 (+) 265 (+) = lift2 (+)
215 (*) = lift2 (*) 266 (*) = lift2 (*)
@@ -222,14 +273,14 @@ instance forall m . KnownNat m => Num (V m)
222 273
223-------------------------------------------------------------------------------- 274--------------------------------------------------------------------------------
224 275
225instance (KnownNat m) => Testable (M m) 276instance (KnownNat m) => Testable (Matrix (Mod m I))
226 where 277 where
227 checkT _ = test 278 checkT _ = test
228 279
229test = (ok, info) 280test = (ok, info)
230 where 281 where
231 v = fromList [3,-5,75] :: V 11 282 v = fromList [3,-5,75] :: Vector (Mod 11 I)
232 m = (3><3) [1..] :: M 11 283 m = (3><3) [1..] :: Matrix (Mod 11 I)
233 284
234 a = (3><3) [1,2 , 3 285 a = (3><3) [1,2 , 3
235 ,4,5 , 6 286 ,4,5 , 6
@@ -237,13 +288,17 @@ test = (ok, info)
237 288
238 b = (3><2) [0..] :: Matrix I 289 b = (3><2) [0..] :: Matrix I
239 290
240 am = fromInt a :: Matrix (F 13) 291 am = fromInt a :: Matrix (Mod 13 I)
241 bm = fromInt b :: Matrix (F 13) 292 bm = fromInt b :: Matrix (Mod 13 I)
242 ad = fromInt a :: Matrix Double 293 ad = fromInt a :: Matrix Double
243 bd = fromInt b :: Matrix Double 294 bd = fromInt b :: Matrix Double
244 295
245 g = (3><3) (repeat (40000)) :: Matrix I 296 g = (3><3) (repeat (40000)) :: Matrix I
246 gm = fromInt g :: Matrix (F 100000) 297 gm = fromInt g :: Matrix (Mod 100000 I)
298
299 lg = (3><3) (repeat (3*10^(9::Int))) :: Matrix Z
300 lgm = fromZ lg :: Matrix (Mod 10000000000 Z)
301
247 302
248 info = do 303 info = do
249 print v 304 print v
@@ -262,11 +317,18 @@ test = (ok, info)
262 print gm 317 print gm
263 print $ gm <> gm 318 print $ gm <> gm
264 319
320 print lg
321 print $ lg <> lg
322 print lgm
323 print $ lgm <> lgm
324
325
265 ok = and 326 ok = and
266 [ toInt (m #> v) == cmod 11 (toInt m #> toInt v ) 327 [ toInt (m #> v) == cmod 11 (toInt m #> toInt v )
267 , am <> gaussElim am bm == bm 328 , am <> gaussElim am bm == bm
268 , prodElements (konst (9:: F 10) (12::Int)) == product (replicate 12 (9:: F 10)) 329 , prodElements (konst (9:: Mod 10 I) (12::Int)) == product (replicate 12 (9:: Mod 10 I))
269 , gm <> gm == konst 0 (3,3) 330 , gm <> gm == konst 0 (3,3)
331 , lgm <> lgm == konst 0 (3,3)
270 ] 332 ]
271 333
272 334
diff --git a/packages/base/src/Internal/Numeric.hs b/packages/base/src/Internal/Numeric.hs
index 2ef96bf..ca17c23 100644
--- a/packages/base/src/Internal/Numeric.hs
+++ b/packages/base/src/Internal/Numeric.hs
@@ -398,8 +398,8 @@ arctan2 = arctan2'
398-- 398--
399-- >>> cmod 3 (range 5) 399-- >>> cmod 3 (range 5)
400-- fromList [0,1,2,0,1] 400-- fromList [0,1,2,0,1]
401cmod :: (Integral e, Container c e) => Int -> c e -> c e 401cmod :: (Integral e, Container c e) => e -> c e -> c e
402cmod m = cmod' (fromIntegral m) 402cmod = cmod'
403 403
404-- | 404-- |
405-- >>>fromInt ((2><2) [0..3]) :: Matrix (Complex Double) 405-- >>>fromInt ((2><2) [0..3]) :: Matrix (Complex Double)
diff --git a/packages/base/src/Numeric/LinearAlgebra.hs b/packages/base/src/Numeric/LinearAlgebra.hs
index ace47e9..56e5053 100644
--- a/packages/base/src/Numeric/LinearAlgebra.hs
+++ b/packages/base/src/Numeric/LinearAlgebra.hs
@@ -141,7 +141,6 @@ module Numeric.LinearAlgebra (
141 Complexable, RealElement, 141 Complexable, RealElement,
142 RealOf, ComplexOf, SingleOf, DoubleOf, 142 RealOf, ComplexOf, SingleOf, DoubleOf,
143 IndexOf, 143 IndexOf,
144 Mod,
145 Field, 144 Field,
146-- Normed, 145-- Normed,
147 Transposable, 146 Transposable,
@@ -159,7 +158,6 @@ import Internal.Numeric hiding (mul)
159import Internal.Algorithms hiding (linearSolve,Normed,orth) 158import Internal.Algorithms hiding (linearSolve,Normed,orth)
160import qualified Internal.Algorithms as A 159import qualified Internal.Algorithms as A
161import Internal.Util 160import Internal.Util
162import Internal.Modular
163import Internal.Random 161import Internal.Random
164import Internal.Sparse((!#>)) 162import Internal.Sparse((!#>))
165import Internal.CG 163import Internal.CG
diff --git a/packages/base/src/Numeric/LinearAlgebra/Data.hs b/packages/base/src/Numeric/LinearAlgebra/Data.hs
index c3e0c1d..1c9bb68 100644
--- a/packages/base/src/Numeric/LinearAlgebra/Data.hs
+++ b/packages/base/src/Numeric/LinearAlgebra/Data.hs
@@ -88,7 +88,7 @@ module Numeric.LinearAlgebra.Data(
88 separable, 88 separable,
89 fromArray2D, 89 fromArray2D,
90 module Data.Complex, 90 module Data.Complex,
91 R,C,I,Z,F, 91 R,C,I,Z,Mod,
92 Vector, Matrix, GMatrix, nRows, nCols 92 Vector, Matrix, GMatrix, nRows, nCols
93 93
94) where 94) where
diff --git a/packages/tests/src/Numeric/LinearAlgebra/Tests.hs b/packages/tests/src/Numeric/LinearAlgebra/Tests.hs
index 2be75de..4cfa5cb 100644
--- a/packages/tests/src/Numeric/LinearAlgebra/Tests.hs
+++ b/packages/tests/src/Numeric/LinearAlgebra/Tests.hs
@@ -383,7 +383,7 @@ intTest = utest "int ops" (fst $ checkT (undefined :: Matrix I))
383 383
384-------------------------------------------------------------------------------- 384--------------------------------------------------------------------------------
385 385
386modularTest = utest "modular ops" (fst $ checkT (undefined :: Matrix (F 13))) 386modularTest = utest "modular ops" (fst $ checkT (undefined :: Matrix (Mod 13 I)))
387 387
388-------------------------------------------------------------------------------- 388--------------------------------------------------------------------------------
389 389