diff options
author | Alberto Ruiz <aruiz@um.es> | 2010-09-08 08:14:27 +0000 |
---|---|---|
committer | Alberto Ruiz <aruiz@um.es> | 2010-09-08 08:14:27 +0000 |
commit | a858bf910291b63603a226c3190ecb36de01b5ba (patch) | |
tree | 1c855b7e29175c8497e3a68c6d3547930ed69d6a /lib | |
parent | 7e103b8ada6fa1479790eac80eda997f5fdaf33f (diff) |
re-export changes
Diffstat (limited to 'lib')
-rw-r--r-- | lib/Data/Packed.hs | 10 | ||||
-rw-r--r-- | lib/Data/Packed/Random.hs | 7 | ||||
-rw-r--r-- | lib/Graphics/Plot.hs | 4 | ||||
-rw-r--r-- | lib/Numeric/Container.hs | 418 | ||||
-rw-r--r-- | lib/Numeric/LinearAlgebra.hs | 10 | ||||
-rw-r--r-- | lib/Numeric/LinearAlgebra/Algorithms.hs | 9 | ||||
-rw-r--r-- | lib/Numeric/LinearAlgebra/Instances.hs | 276 | ||||
-rw-r--r-- | lib/Numeric/LinearAlgebra/Interface.hs | 118 | ||||
-rw-r--r-- | lib/Numeric/LinearAlgebra/LAPACK.hs | 3 | ||||
-rw-r--r-- | lib/Numeric/LinearAlgebra/Linear.hs | 160 | ||||
-rw-r--r-- | lib/Numeric/Matrix.hs | 157 | ||||
-rw-r--r-- | lib/Numeric/Vector.hs | 141 |
12 files changed, 403 insertions, 910 deletions
diff --git a/lib/Data/Packed.hs b/lib/Data/Packed.hs index 8128667..bfc2d8b 100644 --- a/lib/Data/Packed.hs +++ b/lib/Data/Packed.hs | |||
@@ -16,11 +16,13 @@ The Vector and Matrix types and some utilities. | |||
16 | module Data.Packed ( | 16 | module Data.Packed ( |
17 | module Data.Packed.Vector, | 17 | module Data.Packed.Vector, |
18 | module Data.Packed.Matrix, | 18 | module Data.Packed.Matrix, |
19 | module Data.Packed.Random, | 19 | -- module Numeric.Conversion, |
20 | module Data.Complex | 20 | -- module Data.Packed.Random, |
21 | -- module Data.Complex | ||
21 | ) where | 22 | ) where |
22 | 23 | ||
23 | import Data.Packed.Vector | 24 | import Data.Packed.Vector |
24 | import Data.Packed.Matrix | 25 | import Data.Packed.Matrix |
25 | import Data.Packed.Random | 26 | --import Data.Packed.Random |
26 | import Data.Complex | 27 | --import Data.Complex |
28 | --import Numeric.Conversion \ No newline at end of file | ||
diff --git a/lib/Data/Packed/Random.hs b/lib/Data/Packed/Random.hs index 0bc5350..b30b299 100644 --- a/lib/Data/Packed/Random.hs +++ b/lib/Data/Packed/Random.hs | |||
@@ -20,11 +20,12 @@ module Data.Packed.Random ( | |||
20 | ) where | 20 | ) where |
21 | 21 | ||
22 | import Numeric.GSL.Vector | 22 | import Numeric.GSL.Vector |
23 | import Data.Packed.Matrix | 23 | import Data.Packed |
24 | import Numeric.Vector | 24 | import Numeric.Container |
25 | import Numeric.LinearAlgebra.Linear | 25 | import Data.Packed.Internal(constantD) |
26 | import Numeric.LinearAlgebra.Algorithms | 26 | import Numeric.LinearAlgebra.Algorithms |
27 | 27 | ||
28 | constant k v = constantD k v | ||
28 | 29 | ||
29 | -- | Obtains a matrix whose rows are pseudorandom samples from a multivariate | 30 | -- | Obtains a matrix whose rows are pseudorandom samples from a multivariate |
30 | -- Gaussian distribution. | 31 | -- Gaussian distribution. |
diff --git a/lib/Graphics/Plot.hs b/lib/Graphics/Plot.hs index ae88a92..c5b5a4c 100644 --- a/lib/Graphics/Plot.hs +++ b/lib/Graphics/Plot.hs | |||
@@ -28,9 +28,7 @@ module Graphics.Plot( | |||
28 | 28 | ||
29 | ) where | 29 | ) where |
30 | 30 | ||
31 | import Data.Packed | 31 | import Numeric.Matrix |
32 | import Numeric.Vector | ||
33 | import Numeric.LinearAlgebra.Linear | ||
34 | import Data.List(intersperse) | 32 | import Data.List(intersperse) |
35 | import System.Process (system) | 33 | import System.Process (system) |
36 | 34 | ||
diff --git a/lib/Numeric/Container.hs b/lib/Numeric/Container.hs index d6b1342..fc4fb0d 100644 --- a/lib/Numeric/Container.hs +++ b/lib/Numeric/Container.hs | |||
@@ -3,6 +3,7 @@ | |||
3 | {-# LANGUAGE FlexibleInstances #-} | 3 | {-# LANGUAGE FlexibleInstances #-} |
4 | {-# LANGUAGE MultiParamTypeClasses #-} | 4 | {-# LANGUAGE MultiParamTypeClasses #-} |
5 | {-# LANGUAGE FunctionalDependencies #-} | 5 | {-# LANGUAGE FunctionalDependencies #-} |
6 | {-# LANGUAGE UndecidableInstances #-} | ||
6 | 7 | ||
7 | ----------------------------------------------------------------------------- | 8 | ----------------------------------------------------------------------------- |
8 | -- | | 9 | -- | |
@@ -19,103 +20,35 @@ | |||
19 | ----------------------------------------------------------------------------- | 20 | ----------------------------------------------------------------------------- |
20 | 21 | ||
21 | module Numeric.Container ( | 22 | module Numeric.Container ( |
22 | Linear(..), | 23 | --Linear(..), |
23 | Container(..), RealElement, Precision(..), NumericContainer(..), comp, | 24 | Container(..), |
24 | Convert(..), --AutoReal(..), | 25 | Vectors(..), |
25 | RealOf, ComplexOf, SingleOf, DoubleOf, | 26 | Product(..), |
26 | 27 | mXm,mXv,vXm, | |
27 | -- ElementOf, | 28 | outer, kronecker, |
29 | |||
30 | RealElement, --Precision, | ||
31 | ComplexContainer(toComplex,fromComplex,comp,conj), | ||
32 | Convert(..), --AutoReal(..), | ||
33 | RealOf, ComplexOf, SingleOf, DoubleOf, | ||
28 | 34 | ||
29 | IndexOf, | 35 | IndexOf, |
30 | |||
31 | module Data.Complex | 36 | module Data.Complex |
32 | ) where | 37 | ) where |
33 | 38 | ||
34 | import Data.Packed.Vector | 39 | import Data.Packed |
35 | import Data.Packed.Matrix | 40 | import Numeric.Conversion |
36 | import Data.Packed.Internal.Vector | 41 | import Data.Packed.Internal |
37 | --import Data.Packed.Internal.Matrix | 42 | import Numeric.GSL.Vector |
38 | --import qualified Data.Packed.ST as ST | ||
39 | 43 | ||
40 | --import Control.Arrow((***)) | ||
41 | import Data.Complex | 44 | import Data.Complex |
45 | import Control.Monad(ap) | ||
46 | --import Control.Arrow((***)) | ||
42 | 47 | ||
43 | ------------------------------------------------------------------- | 48 | import Numeric.LinearAlgebra.LAPACK(multiplyR,multiplyC,multiplyF,multiplyQ) |
44 | |||
45 | -- | Supported single-double precision type pairs | ||
46 | class (Element s, Element d) => Precision s d | s -> d, d -> s where | ||
47 | double2FloatG :: Vector d -> Vector s | ||
48 | float2DoubleG :: Vector s -> Vector d | ||
49 | |||
50 | instance Precision Float Double where | ||
51 | double2FloatG = double2FloatV | ||
52 | float2DoubleG = float2DoubleV | ||
53 | |||
54 | instance Precision (Complex Float) (Complex Double) where | ||
55 | double2FloatG = asComplex . double2FloatV . asReal | ||
56 | float2DoubleG = asComplex . float2DoubleV . asReal | ||
57 | |||
58 | -- | Supported real types | ||
59 | class (Element t, Element (Complex t), RealFloat t | ||
60 | -- , RealOf t ~ t, RealOf (Complex t) ~ t | ||
61 | ) | ||
62 | => RealElement t | ||
63 | |||
64 | instance RealElement Double | ||
65 | |||
66 | instance RealElement Float | ||
67 | |||
68 | -- | Conversion utilities | ||
69 | class NumericContainer c where | ||
70 | toComplex :: (RealElement e) => (c e, c e) -> c (Complex e) | ||
71 | fromComplex :: (RealElement e) => c (Complex e) -> (c e, c e) | ||
72 | complex' :: (RealElement e) => c e -> c (Complex e) | ||
73 | conj :: (RealElement e) => c (Complex e) -> c (Complex e) | ||
74 | -- cmap :: (Element a, Element b) => (a -> b) -> c a -> c b | ||
75 | single' :: Precision a b => c b -> c a | ||
76 | double' :: Precision a b => c a -> c b | ||
77 | |||
78 | -- | a synonym for "complex'" | ||
79 | comp :: (NumericContainer c, RealElement e) => c e -> c (Complex e) | ||
80 | comp x = complex' x | ||
81 | 49 | ||
82 | ------------------------------------------------------------------- | 50 | ------------------------------------------------------------------- |
83 | 51 | ||
84 | type family RealOf x | ||
85 | |||
86 | type instance RealOf Double = Double | ||
87 | type instance RealOf (Complex Double) = Double | ||
88 | |||
89 | type instance RealOf Float = Float | ||
90 | type instance RealOf (Complex Float) = Float | ||
91 | |||
92 | type family ComplexOf x | ||
93 | |||
94 | type instance ComplexOf Double = Complex Double | ||
95 | type instance ComplexOf (Complex Double) = Complex Double | ||
96 | |||
97 | type instance ComplexOf Float = Complex Float | ||
98 | type instance ComplexOf (Complex Float) = Complex Float | ||
99 | |||
100 | type family SingleOf x | ||
101 | |||
102 | type instance SingleOf Double = Float | ||
103 | type instance SingleOf Float = Float | ||
104 | |||
105 | type instance SingleOf (Complex a) = Complex (SingleOf a) | ||
106 | |||
107 | type family DoubleOf x | ||
108 | |||
109 | type instance DoubleOf Double = Double | ||
110 | type instance DoubleOf Float = Double | ||
111 | |||
112 | type instance DoubleOf (Complex a) = Complex (DoubleOf a) | ||
113 | |||
114 | type family ElementOf c | ||
115 | |||
116 | type instance ElementOf (Vector a) = a | ||
117 | type instance ElementOf (Matrix a) = a | ||
118 | |||
119 | type family IndexOf c | 52 | type family IndexOf c |
120 | 53 | ||
121 | type instance IndexOf Vector = Int | 54 | type instance IndexOf Vector = Int |
@@ -123,75 +56,16 @@ type instance IndexOf Matrix = (Int,Int) | |||
123 | 56 | ||
124 | ------------------------------------------------------------------- | 57 | ------------------------------------------------------------------- |
125 | 58 | ||
126 | class (Element t, Element (RealOf t)) => Convert t where | ||
127 | real :: NumericContainer c => c (RealOf t) -> c t | ||
128 | complex :: NumericContainer c => c t -> c (ComplexOf t) | ||
129 | single :: NumericContainer c => c t -> c (SingleOf t) | ||
130 | double :: NumericContainer c => c t -> c (DoubleOf t) | ||
131 | |||
132 | |||
133 | instance Convert Double where | ||
134 | real = id | ||
135 | complex = complex' | ||
136 | single = single' | ||
137 | double = id | ||
138 | |||
139 | instance Convert Float where | ||
140 | real = id | ||
141 | complex = complex' | ||
142 | single = id | ||
143 | double = double' | ||
144 | |||
145 | instance Convert (Complex Double) where | ||
146 | real = complex' | ||
147 | complex = id | ||
148 | single = single' | ||
149 | double = id | ||
150 | |||
151 | instance Convert (Complex Float) where | ||
152 | real = complex' | ||
153 | complex = id | ||
154 | single = id | ||
155 | double = double' | ||
156 | |||
157 | ------------------------------------------------------------------- | ||
158 | |||
159 | -- | to be replaced by Convert | ||
160 | class Convert t => AutoReal t where | ||
161 | real'' :: NumericContainer c => c Double -> c t | ||
162 | complex'' :: NumericContainer c => c t -> c (Complex Double) | ||
163 | |||
164 | |||
165 | instance AutoReal Double where | ||
166 | real'' = real | ||
167 | complex'' = complex | ||
168 | |||
169 | instance AutoReal (Complex Double) where | ||
170 | real'' = real | ||
171 | complex'' = complex | ||
172 | |||
173 | instance AutoReal Float where | ||
174 | real'' = real . single | ||
175 | complex'' = double . complex | ||
176 | |||
177 | instance AutoReal (Complex Float) where | ||
178 | real'' = real . single | ||
179 | complex'' = double . complex | ||
180 | |||
181 | ------------------------------------------------------------------- | ||
182 | |||
183 | -- | Basic element-by-element functions for numeric containers | 59 | -- | Basic element-by-element functions for numeric containers |
184 | class (Element e) => Container c e where | 60 | class (Element e) => Container c e where |
185 | {- | 61 | |
186 | -- | create a structure with a single element | 62 | -- | create a structure with a single element |
187 | scalar :: e -> c e | 63 | scalar :: e -> c e |
188 | -- | multiply every element by a scalar | ||
189 | scale :: e -> c e -> c e | 64 | scale :: e -> c e -> c e |
190 | -- | scale the element by element reciprocal of the object: | 65 | -- | scale the element by element reciprocal of the object: |
191 | -- | 66 | -- |
192 | -- @scaleRecip 2 (fromList [5,i]) == 2 |> [0.4 :+ 0.0,0.0 :+ (-2.0)]@ | 67 | -- @scaleRecip 2 (fromList [5,i]) == 2 |> [0.4 :+ 0.0,0.0 :+ (-2.0)]@ |
193 | scaleRecip :: e -> c e -> c e | 68 | scaleRecip :: e -> c e -> c e |
194 | -- | add a constant to each element | ||
195 | addConstant :: e -> c e -> c e | 69 | addConstant :: e -> c e -> c e |
196 | add :: c e -> c e -> c e | 70 | add :: c e -> c e -> c e |
197 | sub :: c e -> c e -> c e | 71 | sub :: c e -> c e -> c e |
@@ -200,7 +74,7 @@ class (Element e) => Container c e where | |||
200 | -- | element by element division | 74 | -- | element by element division |
201 | divide :: c e -> c e -> c e | 75 | divide :: c e -> c e -> c e |
202 | equal :: c e -> c e -> Bool | 76 | equal :: c e -> c e -> Bool |
203 | -} | 77 | |
204 | -- | cannot implement instance Functor because of Element class constraint | 78 | -- | cannot implement instance Functor because of Element class constraint |
205 | cmap :: (Element a, Element b) => (a -> b) -> c a -> c b | 79 | cmap :: (Element a, Element b) => (a -> b) -> c a -> c b |
206 | -- | 80 | -- |
@@ -217,23 +91,239 @@ class (Element e) => Container c e where | |||
217 | sumElements :: c e -> e | 91 | sumElements :: c e -> e |
218 | prodElements :: c e -> e | 92 | prodElements :: c e -> e |
219 | 93 | ||
220 | -- | Basic element-by-element functions. | 94 | -- -- | Basic element-by-element functions. |
221 | class (Element e, Container c e) => Linear c e where | 95 | -- class (Element e, Container c e) => Linear c e where |
222 | -- | create a structure with a single element | ||
223 | scalar :: e -> c e | ||
224 | scale :: e -> c e -> c e | ||
225 | -- | scale the element by element reciprocal of the object: | ||
226 | -- | ||
227 | -- @scaleRecip 2 (fromList [5,i]) == 2 |> [0.4 :+ 0.0,0.0 :+ (-2.0)]@ | ||
228 | scaleRecip :: e -> c e -> c e | ||
229 | addConstant :: e -> c e -> c e | ||
230 | add :: c e -> c e -> c e | ||
231 | sub :: c e -> c e -> c e | ||
232 | -- | element by element multiplication | ||
233 | mul :: c e -> c e -> c e | ||
234 | -- | element by element division | ||
235 | divide :: c e -> c e -> c e | ||
236 | equal :: c e -> c e -> Bool | ||
237 | 96 | ||
238 | 97 | ||
98 | -------------------------------------------------------------------------- | ||
239 | 99 | ||
100 | instance Container Vector Float where | ||
101 | scale = vectorMapValF Scale | ||
102 | scaleRecip = vectorMapValF Recip | ||
103 | addConstant = vectorMapValF AddConstant | ||
104 | add = vectorZipF Add | ||
105 | sub = vectorZipF Sub | ||
106 | mul = vectorZipF Mul | ||
107 | divide = vectorZipF Div | ||
108 | equal u v = dim u == dim v && maxElement (vectorMapF Abs (sub u v)) == 0.0 | ||
109 | scalar x = fromList [x] | ||
110 | -- | ||
111 | --instance Container Vector Float where | ||
112 | cmap = mapVector | ||
113 | atIndex = (@>) | ||
114 | minIndex = round . toScalarF MinIdx | ||
115 | maxIndex = round . toScalarF MaxIdx | ||
116 | minElement = toScalarF Min | ||
117 | maxElement = toScalarF Max | ||
118 | sumElements = sumF | ||
119 | prodElements = prodF | ||
120 | |||
121 | instance Container Vector Double where | ||
122 | scale = vectorMapValR Scale | ||
123 | scaleRecip = vectorMapValR Recip | ||
124 | addConstant = vectorMapValR AddConstant | ||
125 | add = vectorZipR Add | ||
126 | sub = vectorZipR Sub | ||
127 | mul = vectorZipR Mul | ||
128 | divide = vectorZipR Div | ||
129 | equal u v = dim u == dim v && maxElement (vectorMapR Abs (sub u v)) == 0.0 | ||
130 | scalar x = fromList [x] | ||
131 | -- | ||
132 | --instance Container Vector Double where | ||
133 | cmap = mapVector | ||
134 | atIndex = (@>) | ||
135 | minIndex = round . toScalarR MinIdx | ||
136 | maxIndex = round . toScalarR MaxIdx | ||
137 | minElement = toScalarR Min | ||
138 | maxElement = toScalarR Max | ||
139 | sumElements = sumR | ||
140 | prodElements = prodR | ||
141 | |||
142 | instance Container Vector (Complex Double) where | ||
143 | scale = vectorMapValC Scale | ||
144 | scaleRecip = vectorMapValC Recip | ||
145 | addConstant = vectorMapValC AddConstant | ||
146 | add = vectorZipC Add | ||
147 | sub = vectorZipC Sub | ||
148 | mul = vectorZipC Mul | ||
149 | divide = vectorZipC Div | ||
150 | equal u v = dim u == dim v && maxElement (mapVector magnitude (sub u v)) == 0.0 | ||
151 | scalar x = fromList [x] | ||
152 | -- | ||
153 | --instance Container Vector (Complex Double) where | ||
154 | cmap = mapVector | ||
155 | atIndex = (@>) | ||
156 | minIndex = minIndex . fst . fromComplex . (zipVectorWith (*) `ap` mapVector conjugate) | ||
157 | maxIndex = maxIndex . fst . fromComplex . (zipVectorWith (*) `ap` mapVector conjugate) | ||
158 | minElement = ap (@>) minIndex | ||
159 | maxElement = ap (@>) maxIndex | ||
160 | sumElements = sumC | ||
161 | prodElements = prodC | ||
162 | |||
163 | instance Container Vector (Complex Float) where | ||
164 | scale = vectorMapValQ Scale | ||
165 | scaleRecip = vectorMapValQ Recip | ||
166 | addConstant = vectorMapValQ AddConstant | ||
167 | add = vectorZipQ Add | ||
168 | sub = vectorZipQ Sub | ||
169 | mul = vectorZipQ Mul | ||
170 | divide = vectorZipQ Div | ||
171 | equal u v = dim u == dim v && maxElement (mapVector magnitude (sub u v)) == 0.0 | ||
172 | scalar x = fromList [x] | ||
173 | -- | ||
174 | --instance Container Vector (Complex Float) where | ||
175 | cmap = mapVector | ||
176 | atIndex = (@>) | ||
177 | minIndex = minIndex . fst . fromComplex . (zipVectorWith (*) `ap` mapVector conjugate) | ||
178 | maxIndex = maxIndex . fst . fromComplex . (zipVectorWith (*) `ap` mapVector conjugate) | ||
179 | minElement = ap (@>) minIndex | ||
180 | maxElement = ap (@>) maxIndex | ||
181 | sumElements = sumQ | ||
182 | prodElements = prodQ | ||
183 | |||
184 | --------------------------------------------------------------- | ||
185 | |||
186 | instance (Container Vector a) => Container Matrix a where | ||
187 | scale x = liftMatrix (scale x) | ||
188 | scaleRecip x = liftMatrix (scaleRecip x) | ||
189 | addConstant x = liftMatrix (addConstant x) | ||
190 | add = liftMatrix2 add | ||
191 | sub = liftMatrix2 sub | ||
192 | mul = liftMatrix2 mul | ||
193 | divide = liftMatrix2 divide | ||
194 | equal a b = cols a == cols b && flatten a `equal` flatten b | ||
195 | scalar x = (1><1) [x] | ||
196 | -- | ||
197 | --instance (Container Vector a) => Container Matrix a where | ||
198 | cmap f = liftMatrix (mapVector f) | ||
199 | atIndex = (@@>) | ||
200 | minIndex m = let (r,c) = (rows m,cols m) | ||
201 | i = (minIndex $ flatten m) | ||
202 | in (i `div` c,(i `mod` c) + 1) | ||
203 | maxIndex m = let (r,c) = (rows m,cols m) | ||
204 | i = (maxIndex $ flatten m) | ||
205 | in (i `div` c,(i `mod` c) + 1) | ||
206 | minElement = ap (@@>) minIndex | ||
207 | maxElement = ap (@@>) maxIndex | ||
208 | sumElements = sumElements . flatten | ||
209 | prodElements = prodElements . flatten | ||
210 | |||
211 | ---------------------------------------------------- | ||
212 | |||
213 | |||
214 | -- | Linear algebraic properties of objects | ||
215 | class Num e => Vectors a e where | ||
216 | -- | dot (inner) product | ||
217 | dot :: a e -> a e -> e | ||
218 | -- | sum of absolute value of elements (differs in complex case from @norm1@ | ||
219 | absSum :: a e -> e | ||
220 | -- | sum of absolute value of elements | ||
221 | norm1 :: a e -> e | ||
222 | -- | euclidean norm | ||
223 | norm2 :: a e -> e | ||
224 | -- | element of maximum magnitude | ||
225 | normInf :: a e -> e | ||
226 | |||
227 | instance Vectors Vector Float where | ||
228 | norm2 = toScalarF Norm2 | ||
229 | absSum = toScalarF AbsSum | ||
230 | dot = dotF | ||
231 | norm1 = toScalarF AbsSum | ||
232 | normInf = maxElement . vectorMapF Abs | ||
233 | |||
234 | instance Vectors Vector Double where | ||
235 | norm2 = toScalarR Norm2 | ||
236 | absSum = toScalarR AbsSum | ||
237 | dot = dotR | ||
238 | norm1 = toScalarR AbsSum | ||
239 | normInf = maxElement . vectorMapR Abs | ||
240 | |||
241 | instance Vectors Vector (Complex Float) where | ||
242 | norm2 = (:+ 0) . toScalarQ Norm2 | ||
243 | absSum = (:+ 0) . toScalarQ AbsSum | ||
244 | dot = dotQ | ||
245 | norm1 = (:+ 0) . sumElements . fst . fromComplex . vectorMapQ Abs | ||
246 | normInf = (:+ 0) . maxElement . fst . fromComplex . vectorMapQ Abs | ||
247 | |||
248 | instance Vectors Vector (Complex Double) where | ||
249 | norm2 = (:+ 0) . toScalarC Norm2 | ||
250 | absSum = (:+ 0) . toScalarC AbsSum | ||
251 | dot = dotC | ||
252 | norm1 = (:+ 0) . sumElements . fst . fromComplex . vectorMapC Abs | ||
253 | normInf = (:+ 0) . maxElement . fst . fromComplex . vectorMapC Abs | ||
254 | |||
255 | ---------------------------------------------------- | ||
256 | |||
257 | class Element t => Product t where | ||
258 | multiply :: Matrix t -> Matrix t -> Matrix t | ||
259 | ctrans :: Matrix t -> Matrix t | ||
260 | |||
261 | instance Product Double where | ||
262 | multiply = multiplyR | ||
263 | ctrans = trans | ||
264 | |||
265 | instance Product (Complex Double) where | ||
266 | multiply = multiplyC | ||
267 | ctrans = conj . trans | ||
268 | |||
269 | instance Product Float where | ||
270 | multiply = multiplyF | ||
271 | ctrans = trans | ||
272 | |||
273 | instance Product (Complex Float) where | ||
274 | multiply = multiplyQ | ||
275 | ctrans = conj . trans | ||
276 | |||
277 | ---------------------------------------------------------- | ||
278 | |||
279 | -- synonym for matrix product | ||
280 | mXm :: Product t => Matrix t -> Matrix t -> Matrix t | ||
281 | mXm = multiply | ||
282 | |||
283 | -- matrix - vector product | ||
284 | mXv :: Product t => Matrix t -> Vector t -> Vector t | ||
285 | mXv m v = flatten $ m `mXm` (asColumn v) | ||
286 | |||
287 | -- vector - matrix product | ||
288 | vXm :: Product t => Vector t -> Matrix t -> Vector t | ||
289 | vXm v m = flatten $ (asRow v) `mXm` m | ||
290 | |||
291 | {- | Outer product of two vectors. | ||
292 | |||
293 | @\> 'fromList' [1,2,3] \`outer\` 'fromList' [5,2,3] | ||
294 | (3><3) | ||
295 | [ 5.0, 2.0, 3.0 | ||
296 | , 10.0, 4.0, 6.0 | ||
297 | , 15.0, 6.0, 9.0 ]@ | ||
298 | -} | ||
299 | outer :: (Product t) => Vector t -> Vector t -> Matrix t | ||
300 | outer u v = asColumn u `multiply` asRow v | ||
301 | |||
302 | {- | Kronecker product of two matrices. | ||
303 | |||
304 | @m1=(2><3) | ||
305 | [ 1.0, 2.0, 0.0 | ||
306 | , 0.0, -1.0, 3.0 ] | ||
307 | m2=(4><3) | ||
308 | [ 1.0, 2.0, 3.0 | ||
309 | , 4.0, 5.0, 6.0 | ||
310 | , 7.0, 8.0, 9.0 | ||
311 | , 10.0, 11.0, 12.0 ]@ | ||
312 | |||
313 | @\> kronecker m1 m2 | ||
314 | (8><9) | ||
315 | [ 1.0, 2.0, 3.0, 2.0, 4.0, 6.0, 0.0, 0.0, 0.0 | ||
316 | , 4.0, 5.0, 6.0, 8.0, 10.0, 12.0, 0.0, 0.0, 0.0 | ||
317 | , 7.0, 8.0, 9.0, 14.0, 16.0, 18.0, 0.0, 0.0, 0.0 | ||
318 | , 10.0, 11.0, 12.0, 20.0, 22.0, 24.0, 0.0, 0.0, 0.0 | ||
319 | , 0.0, 0.0, 0.0, -1.0, -2.0, -3.0, 3.0, 6.0, 9.0 | ||
320 | , 0.0, 0.0, 0.0, -4.0, -5.0, -6.0, 12.0, 15.0, 18.0 | ||
321 | , 0.0, 0.0, 0.0, -7.0, -8.0, -9.0, 21.0, 24.0, 27.0 | ||
322 | , 0.0, 0.0, 0.0, -10.0, -11.0, -12.0, 30.0, 33.0, 36.0 ]@ | ||
323 | -} | ||
324 | kronecker :: (Product t) => Matrix t -> Matrix t -> Matrix t | ||
325 | kronecker a b = fromBlocks | ||
326 | . splitEvery (cols a) | ||
327 | . map (reshape (cols b)) | ||
328 | . toRows | ||
329 | $ flatten a `outer` flatten b | ||
diff --git a/lib/Numeric/LinearAlgebra.hs b/lib/Numeric/LinearAlgebra.hs index da4a4b5..edfd87e 100644 --- a/lib/Numeric/LinearAlgebra.hs +++ b/lib/Numeric/LinearAlgebra.hs | |||
@@ -14,14 +14,12 @@ This module reexports all normally required functions for Linear Algebra applica | |||
14 | ----------------------------------------------------------------------------- | 14 | ----------------------------------------------------------------------------- |
15 | module Numeric.LinearAlgebra ( | 15 | module Numeric.LinearAlgebra ( |
16 | module Numeric.LinearAlgebra.Algorithms, | 16 | module Numeric.LinearAlgebra.Algorithms, |
17 | module Numeric.LinearAlgebra.Interface, | 17 | -- module Numeric.LinearAlgebra.Interface, |
18 | module Numeric.LinearAlgebra.Linear, | ||
19 | module Numeric.Matrix, | 18 | module Numeric.Matrix, |
20 | module Numeric.Vector | 19 | module Data.Packed.Random |
21 | ) where | 20 | ) where |
22 | 21 | ||
23 | import Numeric.LinearAlgebra.Algorithms | 22 | import Numeric.LinearAlgebra.Algorithms |
24 | import Numeric.LinearAlgebra.Interface | 23 | --import Numeric.LinearAlgebra.Interface |
25 | import Numeric.LinearAlgebra.Linear | ||
26 | import Numeric.Matrix | 24 | import Numeric.Matrix |
27 | import Numeric.Vector | 25 | import Data.Packed.Random |
diff --git a/lib/Numeric/LinearAlgebra/Algorithms.hs b/lib/Numeric/LinearAlgebra/Algorithms.hs index 8306961..fa6c475 100644 --- a/lib/Numeric/LinearAlgebra/Algorithms.hs +++ b/lib/Numeric/LinearAlgebra/Algorithms.hs | |||
@@ -77,15 +77,16 @@ module Numeric.LinearAlgebra.Algorithms ( | |||
77 | import Data.Packed.Internal hiding ((//)) | 77 | import Data.Packed.Internal hiding ((//)) |
78 | import Data.Packed.Matrix | 78 | import Data.Packed.Matrix |
79 | import Data.Complex | 79 | import Data.Complex |
80 | import Numeric.LinearAlgebra.Linear | 80 | --import Numeric.LinearAlgebra.Linear |
81 | import Numeric.LinearAlgebra.LAPACK as LAPACK | 81 | import Numeric.LinearAlgebra.LAPACK as LAPACK |
82 | import Data.List(foldl1') | 82 | import Data.List(foldl1') |
83 | import Data.Array | 83 | import Data.Array |
84 | import Numeric.Vector | 84 | import Numeric.Container |
85 | import Numeric.Matrix() | 85 | |
86 | constant x = constantD x | ||
86 | 87 | ||
87 | -- | Auxiliary typeclass used to define generic computations for both real and complex matrices. | 88 | -- | Auxiliary typeclass used to define generic computations for both real and complex matrices. |
88 | class (Product t, Linear Vector t, Container Vector t, Container Matrix t) => Field t where | 89 | class (Product t, Container Vector t, Container Matrix t) => Field t where |
89 | svd' :: Matrix t -> (Matrix t, Vector Double, Matrix t) | 90 | svd' :: Matrix t -> (Matrix t, Vector Double, Matrix t) |
90 | thinSVD' :: Matrix t -> (Matrix t, Vector Double, Matrix t) | 91 | thinSVD' :: Matrix t -> (Matrix t, Vector Double, Matrix t) |
91 | sv' :: Matrix t -> Vector Double | 92 | sv' :: Matrix t -> Vector Double |
diff --git a/lib/Numeric/LinearAlgebra/Instances.hs b/lib/Numeric/LinearAlgebra/Instances.hs deleted file mode 100644 index 04a9d88..0000000 --- a/lib/Numeric/LinearAlgebra/Instances.hs +++ /dev/null | |||
@@ -1,276 +0,0 @@ | |||
1 | {-# LANGUAGE UndecidableInstances, FlexibleInstances #-} | ||
2 | ----------------------------------------------------------------------------- | ||
3 | {- | | ||
4 | Module : Numeric.LinearAlgebra.Instances | ||
5 | Copyright : (c) Alberto Ruiz 2006 | ||
6 | License : GPL-style | ||
7 | |||
8 | Maintainer : Alberto Ruiz (aruiz at um dot es) | ||
9 | Stability : provisional | ||
10 | Portability : portable | ||
11 | |||
12 | This module exports Show, Read, Eq, Num, Fractional, and Floating instances for Vector and Matrix. | ||
13 | |||
14 | In the context of the standard numeric operators, one-component vectors and matrices automatically expand to match the dimensions of the other operand. | ||
15 | |||
16 | -} | ||
17 | ----------------------------------------------------------------------------- | ||
18 | |||
19 | module Numeric.LinearAlgebra.Instances( | ||
20 | ) where | ||
21 | |||
22 | import Numeric.LinearAlgebra.Linear | ||
23 | import Numeric.GSL.Vector | ||
24 | import Data.Packed.Matrix | ||
25 | import Data.Complex | ||
26 | import Data.List(transpose,intersperse) | ||
27 | import Data.Packed.Internal.Vector | ||
28 | |||
29 | #ifndef VECTOR | ||
30 | import Foreign(Storable) | ||
31 | #endif | ||
32 | |||
33 | ------------------------------------------------------------------ | ||
34 | |||
35 | instance (Show a, Element a) => (Show (Matrix a)) where | ||
36 | show m = (sizes++) . dsp . map (map show) . toLists $ m | ||
37 | where sizes = "("++show (rows m)++"><"++show (cols m)++")\n" | ||
38 | |||
39 | dsp as = (++" ]") . (" ["++) . init . drop 2 . unlines . map (" , "++) . map unwords' $ transpose mtp | ||
40 | where | ||
41 | mt = transpose as | ||
42 | longs = map (maximum . map length) mt | ||
43 | mtp = zipWith (\a b -> map (pad a) b) longs mt | ||
44 | pad n str = replicate (n - length str) ' ' ++ str | ||
45 | unwords' = concat . intersperse ", " | ||
46 | |||
47 | #ifndef VECTOR | ||
48 | |||
49 | instance (Show a, Storable a) => (Show (Vector a)) where | ||
50 | show v = (show (dim v))++" |> " ++ show (toList v) | ||
51 | |||
52 | #endif | ||
53 | |||
54 | ------------------------------------------------------------------ | ||
55 | |||
56 | instance (Element a, Read a) => Read (Matrix a) where | ||
57 | readsPrec _ s = [((rs><cs) . read $ listnums, rest)] | ||
58 | where (thing,rest) = breakAt ']' s | ||
59 | (dims,listnums) = breakAt ')' thing | ||
60 | cs = read . init . fst. breakAt ')' . snd . breakAt '<' $ dims | ||
61 | rs = read . snd . breakAt '(' .init . fst . breakAt '>' $ dims | ||
62 | |||
63 | #ifdef VECTOR | ||
64 | |||
65 | instance (Element a, Read a) => Read (Vector a) where | ||
66 | readsPrec _ s = [(fromList . read $ listnums, rest)] | ||
67 | where (thing,trest) = breakAt ']' s | ||
68 | (dims,listnums) = breakAt ' ' (dropWhile (==' ') thing) | ||
69 | rest = drop 31 trest | ||
70 | #else | ||
71 | |||
72 | instance (Element a, Read a) => Read (Vector a) where | ||
73 | readsPrec _ s = [((d |>) . read $ listnums, rest)] | ||
74 | where (thing,rest) = breakAt ']' s | ||
75 | (dims,listnums) = breakAt '>' thing | ||
76 | d = read . init . fst . breakAt '|' $ dims | ||
77 | |||
78 | #endif | ||
79 | |||
80 | breakAt c l = (a++[c],tail b) where | ||
81 | (a,b) = break (==c) l | ||
82 | |||
83 | ------------------------------------------------------------------ | ||
84 | |||
85 | adaptScalar f1 f2 f3 x y | ||
86 | | dim x == 1 = f1 (x@>0) y | ||
87 | | dim y == 1 = f3 x (y@>0) | ||
88 | | otherwise = f2 x y | ||
89 | |||
90 | #ifndef VECTOR | ||
91 | |||
92 | instance Linear Vector a => Eq (Vector a) where | ||
93 | (==) = equal | ||
94 | |||
95 | #endif | ||
96 | |||
97 | instance Num (Vector Float) where | ||
98 | (+) = adaptScalar addConstant add (flip addConstant) | ||
99 | negate = scale (-1) | ||
100 | (*) = adaptScalar scale mul (flip scale) | ||
101 | signum = vectorMapF Sign | ||
102 | abs = vectorMapF Abs | ||
103 | fromInteger = fromList . return . fromInteger | ||
104 | |||
105 | instance Num (Vector Double) where | ||
106 | (+) = adaptScalar addConstant add (flip addConstant) | ||
107 | negate = scale (-1) | ||
108 | (*) = adaptScalar scale mul (flip scale) | ||
109 | signum = vectorMapR Sign | ||
110 | abs = vectorMapR Abs | ||
111 | fromInteger = fromList . return . fromInteger | ||
112 | |||
113 | instance Num (Vector (Complex Double)) where | ||
114 | (+) = adaptScalar addConstant add (flip addConstant) | ||
115 | negate = scale (-1) | ||
116 | (*) = adaptScalar scale mul (flip scale) | ||
117 | signum = vectorMapC Sign | ||
118 | abs = vectorMapC Abs | ||
119 | fromInteger = fromList . return . fromInteger | ||
120 | |||
121 | instance Num (Vector (Complex Float)) where | ||
122 | (+) = adaptScalar addConstant add (flip addConstant) | ||
123 | negate = scale (-1) | ||
124 | (*) = adaptScalar scale mul (flip scale) | ||
125 | signum = vectorMapQ Sign | ||
126 | abs = vectorMapQ Abs | ||
127 | fromInteger = fromList . return . fromInteger | ||
128 | |||
129 | instance Linear Matrix a => Eq (Matrix a) where | ||
130 | (==) = equal | ||
131 | |||
132 | instance (Linear Matrix a, Num (Vector a)) => Num (Matrix a) where | ||
133 | (+) = liftMatrix2Auto (+) | ||
134 | (-) = liftMatrix2Auto (-) | ||
135 | negate = liftMatrix negate | ||
136 | (*) = liftMatrix2Auto (*) | ||
137 | signum = liftMatrix signum | ||
138 | abs = liftMatrix abs | ||
139 | fromInteger = (1><1) . return . fromInteger | ||
140 | |||
141 | --------------------------------------------------- | ||
142 | |||
143 | instance (Linear Vector a, Num (Vector a)) => Fractional (Vector a) where | ||
144 | fromRational n = fromList [fromRational n] | ||
145 | (/) = adaptScalar f divide g where | ||
146 | r `f` v = scaleRecip r v | ||
147 | v `g` r = scale (recip r) v | ||
148 | |||
149 | ------------------------------------------------------- | ||
150 | |||
151 | instance (Linear Vector a, Fractional (Vector a), Num (Matrix a)) => Fractional (Matrix a) where | ||
152 | fromRational n = (1><1) [fromRational n] | ||
153 | (/) = liftMatrix2Auto (/) | ||
154 | |||
155 | --------------------------------------------------------- | ||
156 | |||
157 | instance Floating (Vector Float) where | ||
158 | sin = vectorMapF Sin | ||
159 | cos = vectorMapF Cos | ||
160 | tan = vectorMapF Tan | ||
161 | asin = vectorMapF ASin | ||
162 | acos = vectorMapF ACos | ||
163 | atan = vectorMapF ATan | ||
164 | sinh = vectorMapF Sinh | ||
165 | cosh = vectorMapF Cosh | ||
166 | tanh = vectorMapF Tanh | ||
167 | asinh = vectorMapF ASinh | ||
168 | acosh = vectorMapF ACosh | ||
169 | atanh = vectorMapF ATanh | ||
170 | exp = vectorMapF Exp | ||
171 | log = vectorMapF Log | ||
172 | sqrt = vectorMapF Sqrt | ||
173 | (**) = adaptScalar (vectorMapValF PowSV) (vectorZipF Pow) (flip (vectorMapValF PowVS)) | ||
174 | pi = fromList [pi] | ||
175 | |||
176 | ------------------------------------------------------------- | ||
177 | |||
178 | instance Floating (Vector Double) where | ||
179 | sin = vectorMapR Sin | ||
180 | cos = vectorMapR Cos | ||
181 | tan = vectorMapR Tan | ||
182 | asin = vectorMapR ASin | ||
183 | acos = vectorMapR ACos | ||
184 | atan = vectorMapR ATan | ||
185 | sinh = vectorMapR Sinh | ||
186 | cosh = vectorMapR Cosh | ||
187 | tanh = vectorMapR Tanh | ||
188 | asinh = vectorMapR ASinh | ||
189 | acosh = vectorMapR ACosh | ||
190 | atanh = vectorMapR ATanh | ||
191 | exp = vectorMapR Exp | ||
192 | log = vectorMapR Log | ||
193 | sqrt = vectorMapR Sqrt | ||
194 | (**) = adaptScalar (vectorMapValR PowSV) (vectorZipR Pow) (flip (vectorMapValR PowVS)) | ||
195 | pi = fromList [pi] | ||
196 | |||
197 | ------------------------------------------------------------- | ||
198 | |||
199 | instance Floating (Vector (Complex Double)) where | ||
200 | sin = vectorMapC Sin | ||
201 | cos = vectorMapC Cos | ||
202 | tan = vectorMapC Tan | ||
203 | asin = vectorMapC ASin | ||
204 | acos = vectorMapC ACos | ||
205 | atan = vectorMapC ATan | ||
206 | sinh = vectorMapC Sinh | ||
207 | cosh = vectorMapC Cosh | ||
208 | tanh = vectorMapC Tanh | ||
209 | asinh = vectorMapC ASinh | ||
210 | acosh = vectorMapC ACosh | ||
211 | atanh = vectorMapC ATanh | ||
212 | exp = vectorMapC Exp | ||
213 | log = vectorMapC Log | ||
214 | sqrt = vectorMapC Sqrt | ||
215 | (**) = adaptScalar (vectorMapValC PowSV) (vectorZipC Pow) (flip (vectorMapValC PowVS)) | ||
216 | pi = fromList [pi] | ||
217 | |||
218 | ----------------------------------------------------------- | ||
219 | |||
220 | instance Floating (Vector (Complex Float)) where | ||
221 | sin = vectorMapQ Sin | ||
222 | cos = vectorMapQ Cos | ||
223 | tan = vectorMapQ Tan | ||
224 | asin = vectorMapQ ASin | ||
225 | acos = vectorMapQ ACos | ||
226 | atan = vectorMapQ ATan | ||
227 | sinh = vectorMapQ Sinh | ||
228 | cosh = vectorMapQ Cosh | ||
229 | tanh = vectorMapQ Tanh | ||
230 | asinh = vectorMapQ ASinh | ||
231 | acosh = vectorMapQ ACosh | ||
232 | atanh = vectorMapQ ATanh | ||
233 | exp = vectorMapQ Exp | ||
234 | log = vectorMapQ Log | ||
235 | sqrt = vectorMapQ Sqrt | ||
236 | (**) = adaptScalar (vectorMapValQ PowSV) (vectorZipQ Pow) (flip (vectorMapValQ PowVS)) | ||
237 | pi = fromList [pi] | ||
238 | |||
239 | ----------------------------------------------------------- | ||
240 | |||
241 | instance (Linear Vector a, Floating (Vector a), Fractional (Matrix a)) => Floating (Matrix a) where | ||
242 | sin = liftMatrix sin | ||
243 | cos = liftMatrix cos | ||
244 | tan = liftMatrix tan | ||
245 | asin = liftMatrix asin | ||
246 | acos = liftMatrix acos | ||
247 | atan = liftMatrix atan | ||
248 | sinh = liftMatrix sinh | ||
249 | cosh = liftMatrix cosh | ||
250 | tanh = liftMatrix tanh | ||
251 | asinh = liftMatrix asinh | ||
252 | acosh = liftMatrix acosh | ||
253 | atanh = liftMatrix atanh | ||
254 | exp = liftMatrix exp | ||
255 | log = liftMatrix log | ||
256 | (**) = liftMatrix2Auto (**) | ||
257 | sqrt = liftMatrix sqrt | ||
258 | pi = (1><1) [pi] | ||
259 | |||
260 | --------------------------------------------------------------- | ||
261 | |||
262 | -- instance (Storable a, Num (Vector a)) => Monoid (Vector a) where | ||
263 | -- mempty = 0 { idim = 0 } | ||
264 | -- mappend a b = mconcat [a,b] | ||
265 | -- mconcat = j . filter ((>0).dim) | ||
266 | -- where j [] = mempty | ||
267 | -- j l = join l | ||
268 | |||
269 | --------------------------------------------------------------- | ||
270 | |||
271 | -- instance (NFData a, Storable a) => NFData (Vector a) where | ||
272 | -- rnf = rnf . (@>0) | ||
273 | -- | ||
274 | -- instance (NFData a, Element a) => NFData (Matrix a) where | ||
275 | -- rnf = rnf . flatten | ||
276 | |||
diff --git a/lib/Numeric/LinearAlgebra/Interface.hs b/lib/Numeric/LinearAlgebra/Interface.hs deleted file mode 100644 index fa3e209..0000000 --- a/lib/Numeric/LinearAlgebra/Interface.hs +++ /dev/null | |||
@@ -1,118 +0,0 @@ | |||
1 | {-# OPTIONS_GHC -fglasgow-exts #-} | ||
2 | {-# LANGUAGE UndecidableInstances #-} | ||
3 | ----------------------------------------------------------------------------- | ||
4 | {- | | ||
5 | Module : Numeric.LinearAlgebra.Interface | ||
6 | Copyright : (c) Alberto Ruiz 2007 | ||
7 | License : GPL-style | ||
8 | |||
9 | Maintainer : Alberto Ruiz (aruiz at um dot es) | ||
10 | Stability : provisional | ||
11 | Portability : portable | ||
12 | |||
13 | Some useful operators, and Show, Read, Eq, Num, Fractional, and Floating instances for Vector and Matrix. | ||
14 | |||
15 | In the context of the standard numeric operators, one-component vectors and matrices automatically expand to match the dimensions of the other operand. | ||
16 | |||
17 | |||
18 | -} | ||
19 | ----------------------------------------------------------------------------- | ||
20 | |||
21 | module Numeric.LinearAlgebra.Interface( | ||
22 | (<>),(<.>), | ||
23 | (<\>), | ||
24 | (.*),(*/), | ||
25 | (<|>),(<->), | ||
26 | ) where | ||
27 | |||
28 | import Numeric.Vector | ||
29 | import Numeric.Matrix | ||
30 | import Numeric.LinearAlgebra.Algorithms | ||
31 | import Numeric.LinearAlgebra.Linear | ||
32 | |||
33 | class Mul a b c | a b -> c where | ||
34 | infixl 7 <> | ||
35 | -- | Matrix-matrix, matrix-vector, and vector-matrix products. | ||
36 | (<>) :: Product t => a t -> b t -> c t | ||
37 | |||
38 | instance Mul Matrix Matrix Matrix where | ||
39 | (<>) = mXm | ||
40 | |||
41 | instance Mul Matrix Vector Vector where | ||
42 | (<>) m v = flatten $ m <> (asColumn v) | ||
43 | |||
44 | instance Mul Vector Matrix Vector where | ||
45 | (<>) v m = flatten $ (asRow v) <> m | ||
46 | |||
47 | --------------------------------------------------- | ||
48 | |||
49 | -- | Dot product: @u \<.\> v = dot u v@ | ||
50 | --(<.>) :: (Field t) => Vector t -> Vector t -> t | ||
51 | (<.>) :: Vectors Vector t => Vector t -> Vector t -> t | ||
52 | infixl 7 <.> | ||
53 | (<.>) = dot | ||
54 | |||
55 | ---------------------------------------------------- | ||
56 | |||
57 | {-# DEPRECATED (.*) "use scale a x or scalar a * x" #-} | ||
58 | |||
59 | -- -- | @x .* a = scale x a@ | ||
60 | -- (.*) :: (Linear c a) => a -> c a -> c a | ||
61 | infixl 7 .* | ||
62 | a .* x = scale a x | ||
63 | |||
64 | ---------------------------------------------------- | ||
65 | |||
66 | {-# DEPRECATED (*/) "use scale (recip a) x or x / scalar a" #-} | ||
67 | |||
68 | -- -- | @a *\/ x = scale (recip x) a@ | ||
69 | -- (*/) :: (Linear c a) => c a -> a -> c a | ||
70 | infixl 7 */ | ||
71 | v */ x = scale (recip x) v | ||
72 | |||
73 | -- | least squares solution of a linear system, similar to the \\ operator of Matlab\/Octave (based on linearSolveSVD). | ||
74 | (<\>) :: (Field a) => Matrix a -> Vector a -> Vector a | ||
75 | infixl 7 <\> | ||
76 | m <\> v = flatten (linearSolveSVD m (reshape 1 v)) | ||
77 | |||
78 | ------------------------------------------------ | ||
79 | |||
80 | {-# DEPRECATED (<|>) "define operator a & b = fromBlocks[[a,b]] and use asRow/asColumn to join vectors" #-} | ||
81 | {-# DEPRECATED (<->) "define operator a // b = fromBlocks[[a],[b]] and use asRow/asColumn to join vectors" #-} | ||
82 | |||
83 | class Joinable a b where | ||
84 | joinH :: Element t => a t -> b t -> Matrix t | ||
85 | joinV :: Element t => a t -> b t -> Matrix t | ||
86 | |||
87 | instance Joinable Matrix Matrix where | ||
88 | joinH m1 m2 = fromBlocks [[m1,m2]] | ||
89 | joinV m1 m2 = fromBlocks [[m1],[m2]] | ||
90 | |||
91 | instance Joinable Matrix Vector where | ||
92 | joinH m v = joinH m (asColumn v) | ||
93 | joinV m v = joinV m (asRow v) | ||
94 | |||
95 | instance Joinable Vector Matrix where | ||
96 | joinH v m = joinH (asColumn v) m | ||
97 | joinV v m = joinV (asRow v) m | ||
98 | |||
99 | infixl 4 <|> | ||
100 | infixl 3 <-> | ||
101 | |||
102 | {-- - | Horizontal concatenation of matrices and vectors: | ||
103 | |||
104 | @> (ident 3 \<-\> 3 * ident 3) \<|\> fromList [1..6.0] | ||
105 | (6><4) | ||
106 | [ 1.0, 0.0, 0.0, 1.0 | ||
107 | , 0.0, 1.0, 0.0, 2.0 | ||
108 | , 0.0, 0.0, 1.0, 3.0 | ||
109 | , 3.0, 0.0, 0.0, 4.0 | ||
110 | , 0.0, 3.0, 0.0, 5.0 | ||
111 | , 0.0, 0.0, 3.0, 6.0 ]@ | ||
112 | -} | ||
113 | -- (<|>) :: (Element t, Joinable a b) => a t -> b t -> Matrix t | ||
114 | a <|> b = joinH a b | ||
115 | |||
116 | -- -- | Vertical concatenation of matrices and vectors. | ||
117 | -- (<->) :: (Element t, Joinable a b) => a t -> b t -> Matrix t | ||
118 | a <-> b = joinV a b | ||
diff --git a/lib/Numeric/LinearAlgebra/LAPACK.hs b/lib/Numeric/LinearAlgebra/LAPACK.hs index 5d0154d..288439f 100644 --- a/lib/Numeric/LinearAlgebra/LAPACK.hs +++ b/lib/Numeric/LinearAlgebra/LAPACK.hs | |||
@@ -44,8 +44,7 @@ module Numeric.LinearAlgebra.LAPACK ( | |||
44 | import Data.Packed.Internal | 44 | import Data.Packed.Internal |
45 | import Data.Packed.Matrix | 45 | import Data.Packed.Matrix |
46 | import Data.Complex | 46 | import Data.Complex |
47 | import Numeric.Vector() | 47 | import Numeric.Conversion |
48 | import Numeric.Container | ||
49 | import Numeric.GSL.Vector(vectorMapValR, FunCodeSV(Scale)) | 48 | import Numeric.GSL.Vector(vectorMapValR, FunCodeSV(Scale)) |
50 | import Foreign | 49 | import Foreign |
51 | import Foreign.C.Types (CInt) | 50 | import Foreign.C.Types (CInt) |
diff --git a/lib/Numeric/LinearAlgebra/Linear.hs b/lib/Numeric/LinearAlgebra/Linear.hs deleted file mode 100644 index 775060e..0000000 --- a/lib/Numeric/LinearAlgebra/Linear.hs +++ /dev/null | |||
@@ -1,160 +0,0 @@ | |||
1 | {-# LANGUAGE UndecidableInstances, MultiParamTypeClasses, FlexibleInstances #-} | ||
2 | {-# LANGUAGE FlexibleContexts #-} | ||
3 | {-# LANGUAGE TypeFamilies #-} | ||
4 | ----------------------------------------------------------------------------- | ||
5 | {- | | ||
6 | Module : Numeric.LinearAlgebra.Linear | ||
7 | Copyright : (c) Alberto Ruiz 2006-7 | ||
8 | License : GPL-style | ||
9 | |||
10 | Maintainer : Alberto Ruiz (aruiz at um dot es) | ||
11 | Stability : provisional | ||
12 | Portability : uses ffi | ||
13 | |||
14 | Basic optimized operations on vectors and matrices. | ||
15 | |||
16 | -} | ||
17 | ----------------------------------------------------------------------------- | ||
18 | |||
19 | module Numeric.LinearAlgebra.Linear ( | ||
20 | -- * Linear Algebra Typeclasses | ||
21 | Vectors(..), | ||
22 | -- * Products | ||
23 | Product(..), | ||
24 | mXm,mXv,vXm, | ||
25 | outer, kronecker, | ||
26 | -- * Modules | ||
27 | --module Numeric.Vector, | ||
28 | --module Numeric.Matrix, | ||
29 | module Numeric.Container | ||
30 | ) where | ||
31 | |||
32 | import Data.Packed.Internal.Common | ||
33 | import Data.Packed.Matrix | ||
34 | import Data.Packed.Vector | ||
35 | import Data.Complex | ||
36 | import Numeric.Container | ||
37 | import Numeric.Vector() | ||
38 | import Numeric.Matrix() | ||
39 | import Numeric.GSL.Vector | ||
40 | import Numeric.LinearAlgebra.LAPACK(multiplyR,multiplyC,multiplyF,multiplyQ) | ||
41 | |||
42 | -- | Linear algebraic properties of objects | ||
43 | class Num e => Vectors a e where | ||
44 | -- | dot (inner) product | ||
45 | dot :: a e -> a e -> e | ||
46 | -- | sum of absolute value of elements (differs in complex case from @norm1@ | ||
47 | absSum :: a e -> e | ||
48 | -- | sum of absolute value of elements | ||
49 | norm1 :: a e -> e | ||
50 | -- | euclidean norm | ||
51 | norm2 :: a e -> e | ||
52 | -- | element of maximum magnitude | ||
53 | normInf :: a e -> e | ||
54 | |||
55 | instance Vectors Vector Float where | ||
56 | norm2 = toScalarF Norm2 | ||
57 | absSum = toScalarF AbsSum | ||
58 | dot = dotF | ||
59 | norm1 = toScalarF AbsSum | ||
60 | normInf = maxElement . vectorMapF Abs | ||
61 | |||
62 | instance Vectors Vector Double where | ||
63 | norm2 = toScalarR Norm2 | ||
64 | absSum = toScalarR AbsSum | ||
65 | dot = dotR | ||
66 | norm1 = toScalarR AbsSum | ||
67 | normInf = maxElement . vectorMapR Abs | ||
68 | |||
69 | instance Vectors Vector (Complex Float) where | ||
70 | norm2 = (:+ 0) . toScalarQ Norm2 | ||
71 | absSum = (:+ 0) . toScalarQ AbsSum | ||
72 | dot = dotQ | ||
73 | norm1 = (:+ 0) . sumElements . fst . fromComplex . vectorMapQ Abs | ||
74 | normInf = (:+ 0) . maxElement . fst . fromComplex . vectorMapQ Abs | ||
75 | |||
76 | instance Vectors Vector (Complex Double) where | ||
77 | norm2 = (:+ 0) . toScalarC Norm2 | ||
78 | absSum = (:+ 0) . toScalarC AbsSum | ||
79 | dot = dotC | ||
80 | norm1 = (:+ 0) . sumElements . fst . fromComplex . vectorMapC Abs | ||
81 | normInf = (:+ 0) . maxElement . fst . fromComplex . vectorMapC Abs | ||
82 | |||
83 | ---------------------------------------------------- | ||
84 | |||
85 | class Element t => Product t where | ||
86 | multiply :: Matrix t -> Matrix t -> Matrix t | ||
87 | ctrans :: Matrix t -> Matrix t | ||
88 | |||
89 | instance Product Double where | ||
90 | multiply = multiplyR | ||
91 | ctrans = trans | ||
92 | |||
93 | instance Product (Complex Double) where | ||
94 | multiply = multiplyC | ||
95 | ctrans = conj . trans | ||
96 | |||
97 | instance Product Float where | ||
98 | multiply = multiplyF | ||
99 | ctrans = trans | ||
100 | |||
101 | instance Product (Complex Float) where | ||
102 | multiply = multiplyQ | ||
103 | ctrans = conj . trans | ||
104 | |||
105 | ---------------------------------------------------------- | ||
106 | |||
107 | -- synonym for matrix product | ||
108 | mXm :: Product t => Matrix t -> Matrix t -> Matrix t | ||
109 | mXm = multiply | ||
110 | |||
111 | -- matrix - vector product | ||
112 | mXv :: Product t => Matrix t -> Vector t -> Vector t | ||
113 | mXv m v = flatten $ m `mXm` (asColumn v) | ||
114 | |||
115 | -- vector - matrix product | ||
116 | vXm :: Product t => Vector t -> Matrix t -> Vector t | ||
117 | vXm v m = flatten $ (asRow v) `mXm` m | ||
118 | |||
119 | {- | Outer product of two vectors. | ||
120 | |||
121 | @\> 'fromList' [1,2,3] \`outer\` 'fromList' [5,2,3] | ||
122 | (3><3) | ||
123 | [ 5.0, 2.0, 3.0 | ||
124 | , 10.0, 4.0, 6.0 | ||
125 | , 15.0, 6.0, 9.0 ]@ | ||
126 | -} | ||
127 | outer :: (Product t) => Vector t -> Vector t -> Matrix t | ||
128 | outer u v = asColumn u `multiply` asRow v | ||
129 | |||
130 | {- | Kronecker product of two matrices. | ||
131 | |||
132 | @m1=(2><3) | ||
133 | [ 1.0, 2.0, 0.0 | ||
134 | , 0.0, -1.0, 3.0 ] | ||
135 | m2=(4><3) | ||
136 | [ 1.0, 2.0, 3.0 | ||
137 | , 4.0, 5.0, 6.0 | ||
138 | , 7.0, 8.0, 9.0 | ||
139 | , 10.0, 11.0, 12.0 ]@ | ||
140 | |||
141 | @\> kronecker m1 m2 | ||
142 | (8><9) | ||
143 | [ 1.0, 2.0, 3.0, 2.0, 4.0, 6.0, 0.0, 0.0, 0.0 | ||
144 | , 4.0, 5.0, 6.0, 8.0, 10.0, 12.0, 0.0, 0.0, 0.0 | ||
145 | , 7.0, 8.0, 9.0, 14.0, 16.0, 18.0, 0.0, 0.0, 0.0 | ||
146 | , 10.0, 11.0, 12.0, 20.0, 22.0, 24.0, 0.0, 0.0, 0.0 | ||
147 | , 0.0, 0.0, 0.0, -1.0, -2.0, -3.0, 3.0, 6.0, 9.0 | ||
148 | , 0.0, 0.0, 0.0, -4.0, -5.0, -6.0, 12.0, 15.0, 18.0 | ||
149 | , 0.0, 0.0, 0.0, -7.0, -8.0, -9.0, 21.0, 24.0, 27.0 | ||
150 | , 0.0, 0.0, 0.0, -10.0, -11.0, -12.0, 30.0, 33.0, 36.0 ]@ | ||
151 | -} | ||
152 | kronecker :: (Product t) => Matrix t -> Matrix t -> Matrix t | ||
153 | kronecker a b = fromBlocks | ||
154 | . splitEvery (cols a) | ||
155 | . map (reshape (cols b)) | ||
156 | . toRows | ||
157 | $ flatten a `outer` flatten b | ||
158 | |||
159 | |||
160 | ------------------------------------------------------------------- | ||
diff --git a/lib/Numeric/Matrix.hs b/lib/Numeric/Matrix.hs index fa3f94a..6ba870f 100644 --- a/lib/Numeric/Matrix.hs +++ b/lib/Numeric/Matrix.hs | |||
@@ -3,6 +3,7 @@ | |||
3 | {-# LANGUAGE FlexibleInstances #-} | 3 | {-# LANGUAGE FlexibleInstances #-} |
4 | {-# LANGUAGE UndecidableInstances #-} | 4 | {-# LANGUAGE UndecidableInstances #-} |
5 | {-# LANGUAGE MultiParamTypeClasses #-} | 5 | {-# LANGUAGE MultiParamTypeClasses #-} |
6 | {-# LANGUAGE FunctionalDependencies #-} | ||
6 | 7 | ||
7 | ----------------------------------------------------------------------------- | 8 | ----------------------------------------------------------------------------- |
8 | -- | | 9 | -- | |
@@ -14,12 +15,22 @@ | |||
14 | -- Stability : provisional | 15 | -- Stability : provisional |
15 | -- Portability : portable | 16 | -- Portability : portable |
16 | -- | 17 | -- |
17 | -- Numeric instances and functions for 'Data.Packed.Matrix's | 18 | -- Numeric instances and functions for 'Matrix'. |
19 | -- In the context of the standard numeric operators, one-component | ||
20 | -- vectors and matrices automatically expand to match the dimensions of the other operand. | ||
18 | -- | 21 | -- |
19 | ----------------------------------------------------------------------------- | 22 | ----------------------------------------------------------------------------- |
20 | 23 | ||
21 | module Numeric.Matrix ( | 24 | module Numeric.Matrix ( |
22 | module Data.Packed.Matrix, | 25 | -- * Basic functions |
26 | module Data.Packed.Matrix, | ||
27 | module Numeric.Vector, | ||
28 | --module Numeric.Container, | ||
29 | -- * Operators | ||
30 | (<>), (<\>), | ||
31 | -- * Deprecated | ||
32 | (.*),(*/),(<|>),(<->), | ||
33 | vectorMax,vectorMin | ||
23 | ) where | 34 | ) where |
24 | 35 | ||
25 | ------------------------------------------------------------------- | 36 | ------------------------------------------------------------------- |
@@ -28,18 +39,18 @@ import Data.Packed.Vector | |||
28 | import Data.Packed.Matrix | 39 | import Data.Packed.Matrix |
29 | import Numeric.Container | 40 | import Numeric.Container |
30 | --import Numeric.LinearAlgebra.Linear | 41 | --import Numeric.LinearAlgebra.Linear |
31 | import Numeric.Vector() | 42 | import Numeric.Vector |
43 | import Numeric.LinearAlgebra.Algorithms | ||
44 | --import Control.Monad(ap) | ||
32 | 45 | ||
33 | import Control.Monad(ap) | 46 | --import Control.Arrow((***)) |
34 | |||
35 | import Control.Arrow((***)) | ||
36 | 47 | ||
37 | ------------------------------------------------------------------- | 48 | ------------------------------------------------------------------- |
38 | 49 | ||
39 | instance Linear Matrix a => Eq (Matrix a) where | 50 | instance Container Matrix a => Eq (Matrix a) where |
40 | (==) = equal | 51 | (==) = equal |
41 | 52 | ||
42 | instance (Linear Matrix a, Num (Vector a)) => Num (Matrix a) where | 53 | instance (Container Matrix a, Num (Vector a)) => Num (Matrix a) where |
43 | (+) = liftMatrix2Auto (+) | 54 | (+) = liftMatrix2Auto (+) |
44 | (-) = liftMatrix2Auto (-) | 55 | (-) = liftMatrix2Auto (-) |
45 | negate = liftMatrix negate | 56 | negate = liftMatrix negate |
@@ -50,13 +61,13 @@ instance (Linear Matrix a, Num (Vector a)) => Num (Matrix a) where | |||
50 | 61 | ||
51 | --------------------------------------------------- | 62 | --------------------------------------------------- |
52 | 63 | ||
53 | instance (Linear Vector a, Fractional (Vector a), Num (Matrix a)) => Fractional (Matrix a) where | 64 | instance (Container Vector a, Fractional (Vector a), Num (Matrix a)) => Fractional (Matrix a) where |
54 | fromRational n = (1><1) [fromRational n] | 65 | fromRational n = (1><1) [fromRational n] |
55 | (/) = liftMatrix2Auto (/) | 66 | (/) = liftMatrix2Auto (/) |
56 | 67 | ||
57 | --------------------------------------------------------- | 68 | --------------------------------------------------------- |
58 | 69 | ||
59 | instance (Linear Vector a, Floating (Vector a), Fractional (Matrix a)) => Floating (Matrix a) where | 70 | instance (Container Vector a, Floating (Vector a), Fractional (Matrix a)) => Floating (Matrix a) where |
60 | sin = liftMatrix sin | 71 | sin = liftMatrix sin |
61 | cos = liftMatrix cos | 72 | cos = liftMatrix cos |
62 | tan = liftMatrix tan | 73 | tan = liftMatrix tan |
@@ -75,43 +86,93 @@ instance (Linear Vector a, Floating (Vector a), Fractional (Matrix a)) => Floati | |||
75 | sqrt = liftMatrix sqrt | 86 | sqrt = liftMatrix sqrt |
76 | pi = (1><1) [pi] | 87 | pi = (1><1) [pi] |
77 | 88 | ||
78 | --------------------------------------------------------------- | 89 | -------------------------------------------------------- |
79 | 90 | ||
80 | instance NumericContainer Matrix where | 91 | class Mul a b c | a b -> c where |
81 | toComplex = uncurry $ liftMatrix2 $ curry toComplex | 92 | infixl 7 <> |
82 | fromComplex z = (reshape c *** reshape c) . fromComplex . flatten $ z | 93 | -- | Matrix-matrix, matrix-vector, and vector-matrix products. |
83 | where c = cols z | 94 | (<>) :: Product t => a t -> b t -> c t |
84 | complex' = liftMatrix complex' | 95 | |
85 | conj = liftMatrix conj | 96 | instance Mul Matrix Matrix Matrix where |
86 | -- cmap f = liftMatrix (cmap f) | 97 | (<>) = mXm |
87 | single' = liftMatrix single' | 98 | |
88 | double' = liftMatrix double' | 99 | instance Mul Matrix Vector Vector where |
89 | 100 | (<>) m v = flatten $ m <> (asColumn v) | |
90 | --------------------------------------------------------------- | 101 | |
91 | 102 | instance Mul Vector Matrix Vector where | |
92 | instance (Linear Vector a, Container Matrix a) => Linear Matrix a where | 103 | (<>) v m = flatten $ (asRow v) <> m |
93 | scale x = liftMatrix (scale x) | ||
94 | scaleRecip x = liftMatrix (scaleRecip x) | ||
95 | addConstant x = liftMatrix (addConstant x) | ||
96 | add = liftMatrix2 add | ||
97 | sub = liftMatrix2 sub | ||
98 | mul = liftMatrix2 mul | ||
99 | divide = liftMatrix2 divide | ||
100 | equal a b = cols a == cols b && flatten a `equal` flatten b | ||
101 | scalar x = (1><1) [x] | ||
102 | -- | ||
103 | instance (Container Vector a) => Container Matrix a where | ||
104 | cmap f = liftMatrix (mapVector f) | ||
105 | atIndex = (@@>) | ||
106 | minIndex m = let (r,c) = (rows m,cols m) | ||
107 | i = (minIndex $ flatten m) | ||
108 | in (i `div` c,(i `mod` c) + 1) | ||
109 | maxIndex m = let (r,c) = (rows m,cols m) | ||
110 | i = (maxIndex $ flatten m) | ||
111 | in (i `div` c,(i `mod` c) + 1) | ||
112 | minElement = ap (@@>) minIndex | ||
113 | maxElement = ap (@@>) maxIndex | ||
114 | sumElements = sumElements . flatten | ||
115 | prodElements = prodElements . flatten | ||
116 | 104 | ||
117 | ---------------------------------------------------- | 105 | ---------------------------------------------------- |
106 | |||
107 | {-# DEPRECATED (.*) "use scale a x or scalar a * x" #-} | ||
108 | |||
109 | -- -- | @x .* a = scale x a@ | ||
110 | -- (.*) :: (Linear c a) => a -> c a -> c a | ||
111 | infixl 7 .* | ||
112 | a .* x = scale a x | ||
113 | |||
114 | ---------------------------------------------------- | ||
115 | |||
116 | {-# DEPRECATED (*/) "use scale (recip a) x or x / scalar a" #-} | ||
117 | |||
118 | -- -- | @a *\/ x = scale (recip x) a@ | ||
119 | -- (*/) :: (Linear c a) => c a -> a -> c a | ||
120 | infixl 7 */ | ||
121 | v */ x = scale (recip x) v | ||
122 | |||
123 | -- | least squares solution of a linear system, similar to the \\ operator of Matlab\/Octave (based on linearSolveSVD). | ||
124 | (<\>) :: (Field a) => Matrix a -> Vector a -> Vector a | ||
125 | infixl 7 <\> | ||
126 | m <\> v = flatten (linearSolveSVD m (reshape 1 v)) | ||
127 | |||
128 | ------------------------------------------------ | ||
129 | |||
130 | {-# DEPRECATED (<|>) "define operator a & b = fromBlocks[[a,b]] and use asRow/asColumn to join vectors" #-} | ||
131 | {-# DEPRECATED (<->) "define operator a // b = fromBlocks[[a],[b]] and use asRow/asColumn to join vectors" #-} | ||
132 | |||
133 | class Joinable a b where | ||
134 | joinH :: Element t => a t -> b t -> Matrix t | ||
135 | joinV :: Element t => a t -> b t -> Matrix t | ||
136 | |||
137 | instance Joinable Matrix Matrix where | ||
138 | joinH m1 m2 = fromBlocks [[m1,m2]] | ||
139 | joinV m1 m2 = fromBlocks [[m1],[m2]] | ||
140 | |||
141 | instance Joinable Matrix Vector where | ||
142 | joinH m v = joinH m (asColumn v) | ||
143 | joinV m v = joinV m (asRow v) | ||
144 | |||
145 | instance Joinable Vector Matrix where | ||
146 | joinH v m = joinH (asColumn v) m | ||
147 | joinV v m = joinV (asRow v) m | ||
148 | |||
149 | infixl 4 <|> | ||
150 | infixl 3 <-> | ||
151 | |||
152 | {-- - | Horizontal concatenation of matrices and vectors: | ||
153 | |||
154 | @> (ident 3 \<-\> 3 * ident 3) \<|\> fromList [1..6.0] | ||
155 | (6><4) | ||
156 | [ 1.0, 0.0, 0.0, 1.0 | ||
157 | , 0.0, 1.0, 0.0, 2.0 | ||
158 | , 0.0, 0.0, 1.0, 3.0 | ||
159 | , 3.0, 0.0, 0.0, 4.0 | ||
160 | , 0.0, 3.0, 0.0, 5.0 | ||
161 | , 0.0, 0.0, 3.0, 6.0 ]@ | ||
162 | -} | ||
163 | -- (<|>) :: (Element t, Joinable a b) => a t -> b t -> Matrix t | ||
164 | a <|> b = joinH a b | ||
165 | |||
166 | -- -- | Vertical concatenation of matrices and vectors. | ||
167 | -- (<->) :: (Element t, Joinable a b) => a t -> b t -> Matrix t | ||
168 | a <-> b = joinV a b | ||
169 | |||
170 | ------------------------------------------------------------------- | ||
171 | |||
172 | {-# DEPRECATED vectorMin "use minElement" #-} | ||
173 | vectorMin :: (Container Vector t, Element t) => Vector t -> t | ||
174 | vectorMin = minElement | ||
175 | |||
176 | {-# DEPRECATED vectorMax "use maxElement" #-} | ||
177 | vectorMax :: (Container Vector t, Element t) => Vector t -> t | ||
178 | vectorMax = maxElement | ||
diff --git a/lib/Numeric/Vector.hs b/lib/Numeric/Vector.hs index 55d645a..9427243 100644 --- a/lib/Numeric/Vector.hs +++ b/lib/Numeric/Vector.hs | |||
@@ -14,24 +14,26 @@ | |||
14 | -- Stability : provisional | 14 | -- Stability : provisional |
15 | -- Portability : portable | 15 | -- Portability : portable |
16 | -- | 16 | -- |
17 | -- Numeric instances and functions for 'Data.Packed.Vector's | 17 | -- Numeric instances and functions for 'Vector'. |
18 | -- | 18 | -- |
19 | ----------------------------------------------------------------------------- | 19 | ----------------------------------------------------------------------------- |
20 | 20 | ||
21 | module Numeric.Vector ( | 21 | module Numeric.Vector ( |
22 | -- * Vector creation | 22 | -- * Basic vector functions |
23 | constant, linspace, | 23 | module Data.Packed.Vector, |
24 | module Data.Packed.Vector | 24 | module Numeric.Container, |
25 | -- * Vector creation | ||
26 | constant, linspace, | ||
27 | -- * Operators | ||
28 | (<.>) | ||
25 | ) where | 29 | ) where |
26 | 30 | ||
27 | import Data.Complex | 31 | import Data.Complex |
28 | 32 | ||
29 | import Control.Monad(ap) | ||
30 | |||
31 | import Data.Packed.Vector | 33 | import Data.Packed.Vector |
32 | import Data.Packed.Internal.Matrix(Element(..)) | 34 | import Data.Packed.Internal.Matrix |
33 | import Data.Packed.Internal.Vector(asComplex,asReal) | 35 | --import Data.Packed.Internal.Vector(asComplex,asReal) |
34 | import Data.Packed.Matrix(toColumns,fromColumns,flatten,reshape) | 36 | --import Data.Packed.Matrix(toColumns,fromColumns,flatten,reshape) |
35 | import Numeric.GSL.Vector | 37 | import Numeric.GSL.Vector |
36 | 38 | ||
37 | import Numeric.Container | 39 | import Numeric.Container |
@@ -92,10 +94,15 @@ Logarithmic spacing can be defined as follows: | |||
92 | 94 | ||
93 | @logspace n (a,b) = 10 ** linspace n (a,b)@ | 95 | @logspace n (a,b) = 10 ** linspace n (a,b)@ |
94 | -} | 96 | -} |
95 | linspace :: (Enum e, Linear Vector e) => Int -> (e, e) -> Vector e | 97 | linspace :: (Enum e, Container Vector e) => Int -> (e, e) -> Vector e |
96 | linspace n (a,b) = addConstant a $ scale s $ fromList [0 .. fromIntegral n-1] | 98 | linspace n (a,b) = addConstant a $ scale s $ fromList [0 .. fromIntegral n-1] |
97 | where s = (b-a)/fromIntegral (n-1) | 99 | where s = (b-a)/fromIntegral (n-1) |
98 | 100 | ||
101 | -- | Dot product: @u \<.\> v = dot u v@ | ||
102 | (<.>) :: Vectors Vector t => Vector t -> Vector t -> t | ||
103 | infixl 7 <.> | ||
104 | (<.>) = dot | ||
105 | |||
99 | ------------------------------------------------------------------ | 106 | ------------------------------------------------------------------ |
100 | 107 | ||
101 | adaptScalar f1 f2 f3 x y | 108 | adaptScalar f1 f2 f3 x y |
@@ -107,7 +114,7 @@ adaptScalar f1 f2 f3 x y | |||
107 | 114 | ||
108 | #ifndef VECTOR | 115 | #ifndef VECTOR |
109 | 116 | ||
110 | instance Linear Vector a => Eq (Vector a) where | 117 | instance Container Vector a => Eq (Vector a) where |
111 | (==) = equal | 118 | (==) = equal |
112 | 119 | ||
113 | #endif | 120 | #endif |
@@ -146,7 +153,7 @@ instance Num (Vector (Complex Float)) where | |||
146 | 153 | ||
147 | --------------------------------------------------- | 154 | --------------------------------------------------- |
148 | 155 | ||
149 | instance (Linear Vector a, Num (Vector a)) => Fractional (Vector a) where | 156 | instance (Container Vector a, Num (Vector a)) => Fractional (Vector a) where |
150 | fromRational n = fromList [fromRational n] | 157 | fromRational n = fromList [fromRational n] |
151 | (/) = adaptScalar f divide g where | 158 | (/) = adaptScalar f divide g where |
152 | r `f` v = scaleRecip r v | 159 | r `f` v = scaleRecip r v |
@@ -254,116 +261,6 @@ instance Floating (Vector (Complex Float)) where | |||
254 | -- instance (NFData a, Element a) => NFData (Matrix a) where | 261 | -- instance (NFData a, Element a) => NFData (Matrix a) where |
255 | -- rnf = rnf . flatten | 262 | -- rnf = rnf . flatten |
256 | 263 | ||
257 | --------------------------------------------------------------- | ||
258 | |||
259 | -- | obtains the complex conjugate of a complex vector | ||
260 | conjV :: (RealElement a) => Vector (Complex a) -> Vector (Complex a) | ||
261 | conjV = mapVector conjugate | ||
262 | |||
263 | -- | creates a complex vector from vectors with real and imaginary parts | ||
264 | toComplexV :: (RealElement a) => (Vector a, Vector a) -> Vector (Complex a) | ||
265 | toComplexV (r,i) = asComplex $ flatten $ fromColumns [r,i] | ||
266 | |||
267 | -- | the inverse of 'toComplex' | ||
268 | fromComplexV :: (RealElement a) => Vector (Complex a) -> (Vector a, Vector a) | ||
269 | fromComplexV z = (r,i) where | ||
270 | [r,i] = toColumns $ reshape 2 $ asReal z | ||
271 | 264 | ||
272 | -------------------------------------------------------------------------- | 265 | -------------------------------------------------------------------------- |
273 | 266 | ||
274 | instance NumericContainer Vector where | ||
275 | toComplex = toComplexV | ||
276 | fromComplex = fromComplexV | ||
277 | complex' v = toComplex (v,constant 0 (dim v)) | ||
278 | conj = conjV | ||
279 | -- cmap = mapVector | ||
280 | single' = double2FloatG | ||
281 | double' = float2DoubleG | ||
282 | |||
283 | -------------------------------------------------------------------------- | ||
284 | |||
285 | instance Linear Vector Float where | ||
286 | scale = vectorMapValF Scale | ||
287 | scaleRecip = vectorMapValF Recip | ||
288 | addConstant = vectorMapValF AddConstant | ||
289 | add = vectorZipF Add | ||
290 | sub = vectorZipF Sub | ||
291 | mul = vectorZipF Mul | ||
292 | divide = vectorZipF Div | ||
293 | equal u v = dim u == dim v && maxElement (vectorMapF Abs (sub u v)) == 0.0 | ||
294 | scalar x = fromList [x] | ||
295 | -- | ||
296 | instance Container Vector Float where | ||
297 | cmap = mapVector | ||
298 | atIndex = (@>) | ||
299 | minIndex = round . toScalarF MinIdx | ||
300 | maxIndex = round . toScalarF MaxIdx | ||
301 | minElement = toScalarF Min | ||
302 | maxElement = toScalarF Max | ||
303 | sumElements = sumF | ||
304 | prodElements = prodF | ||
305 | |||
306 | instance Linear Vector Double where | ||
307 | scale = vectorMapValR Scale | ||
308 | scaleRecip = vectorMapValR Recip | ||
309 | addConstant = vectorMapValR AddConstant | ||
310 | add = vectorZipR Add | ||
311 | sub = vectorZipR Sub | ||
312 | mul = vectorZipR Mul | ||
313 | divide = vectorZipR Div | ||
314 | equal u v = dim u == dim v && maxElement (vectorMapR Abs (sub u v)) == 0.0 | ||
315 | scalar x = fromList [x] | ||
316 | -- | ||
317 | instance Container Vector Double where | ||
318 | cmap = mapVector | ||
319 | atIndex = (@>) | ||
320 | minIndex = round . toScalarR MinIdx | ||
321 | maxIndex = round . toScalarR MaxIdx | ||
322 | minElement = toScalarR Min | ||
323 | maxElement = toScalarR Max | ||
324 | sumElements = sumR | ||
325 | prodElements = prodR | ||
326 | |||
327 | instance Linear Vector (Complex Double) where | ||
328 | scale = vectorMapValC Scale | ||
329 | scaleRecip = vectorMapValC Recip | ||
330 | addConstant = vectorMapValC AddConstant | ||
331 | add = vectorZipC Add | ||
332 | sub = vectorZipC Sub | ||
333 | mul = vectorZipC Mul | ||
334 | divide = vectorZipC Div | ||
335 | equal u v = dim u == dim v && maxElement (mapVector magnitude (sub u v)) == 0.0 | ||
336 | scalar x = fromList [x] | ||
337 | -- | ||
338 | instance Container Vector (Complex Double) where | ||
339 | cmap = mapVector | ||
340 | atIndex = (@>) | ||
341 | minIndex = minIndex . fst . fromComplex . (zipVectorWith (*) `ap` mapVector conjugate) | ||
342 | maxIndex = maxIndex . fst . fromComplex . (zipVectorWith (*) `ap` mapVector conjugate) | ||
343 | minElement = ap (@>) minIndex | ||
344 | maxElement = ap (@>) maxIndex | ||
345 | sumElements = sumC | ||
346 | prodElements = prodC | ||
347 | |||
348 | instance Linear Vector (Complex Float) where | ||
349 | scale = vectorMapValQ Scale | ||
350 | scaleRecip = vectorMapValQ Recip | ||
351 | addConstant = vectorMapValQ AddConstant | ||
352 | add = vectorZipQ Add | ||
353 | sub = vectorZipQ Sub | ||
354 | mul = vectorZipQ Mul | ||
355 | divide = vectorZipQ Div | ||
356 | equal u v = dim u == dim v && maxElement (mapVector magnitude (sub u v)) == 0.0 | ||
357 | scalar x = fromList [x] | ||
358 | -- | ||
359 | instance Container Vector (Complex Float) where | ||
360 | cmap = mapVector | ||
361 | atIndex = (@>) | ||
362 | minIndex = minIndex . fst . fromComplex . (zipVectorWith (*) `ap` mapVector conjugate) | ||
363 | maxIndex = maxIndex . fst . fromComplex . (zipVectorWith (*) `ap` mapVector conjugate) | ||
364 | minElement = ap (@>) minIndex | ||
365 | maxElement = ap (@>) maxIndex | ||
366 | sumElements = sumQ | ||
367 | prodElements = prodQ | ||
368 | |||
369 | --------------------------------------------------------------- | ||